Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq111 100 3e-16 seq76 93.3 5e-14 >seq111 Length=3622730 Score = 100 bits (110), Expect = 3e-16 Identities = 798/1278 (62%), Gaps = 29/1278 (2%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| || | |||||| ||||| || ||||| ||| || | ||| || ||| ||| Sbjct 920398 TAGATGTTCGACGTGTACGGCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAG 920339 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||||||||| | ||| || ||| |||| ||| | | ||| || Sbjct 920338 GCGGTGGGCATGGGTGCGACGAGCAGAGAGTTGCGGATACCGTGCTGAGCAATCTCAGCC 920279 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTG---CCACATATCAAACTGG 114118 || | | ||||||||| | || | ||| ||| |||||| || |||| Sbjct 920278 TTCACGCTGTCCCAGTCCCAA---AGGTCGGTCGGTGCCTTGTTCCACATGTCGTACTGC 920222 Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178 | ||| || || ||||| || |||| || |||||||| || || | | || || Sbjct 920221 AAGATGCCCTGAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCA 920162 Query 114179 AATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 | || ||| || || || ||| || || || ||||| ||||| | || Sbjct 920161 AGATCAATCGAG---GCAGTGATGGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTG 920105 Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295 | |||||||||| |||||| || | | || | || |||| || ||| Sbjct 920104 AGCTGCTTGGCCTCGGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGA 920045 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---C 114352 || | |||||| | | || ||||| || | ||| || ||||| || ||| | Sbjct 920044 CCGTTGACACCCACTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGC---CTCGGGC 919988 Query 114353 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 114412 || || || || | ||||| | | | || | || || || |||| || | Sbjct 919987 ACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACC 919928 Query 114413 TCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 114471 || |||||||| | | | || | || || |||| | | ||| | | || || || Sbjct 919927 TCGTGAAGCTTCTTGAAGTCGTAGACACCGT-TCTCAACGTCGACGAAGGTCGGGAGAGC 919869 Query 114472 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 114531 | || |||| || || |||| | |||||| |||||||||| | || || Sbjct 919868 CAGCGAGGCCAAGTTGCAGACAGCGACCTCATCGGGGGCAGTGTACTCGACGATCTCGCA 919809 Query 114532 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 114591 || | || || || || || || | ||||||||| || ||| ||| || Sbjct 919808 GCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTG 919749 Query 114592 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651 ||||||||| |||||| | || | || ||||| |||| || |||||| || | ||| Sbjct 919748 ATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCA 919689 Query 114652 GA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGA 114710 | | || | | || || || | | | || ||||||| |||||||| ||| | Sbjct 919688 AAGCTTCTGAGCGCGG-ACGGTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAA 919630 Query 114711 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 114770 | || || ||||| || || | |||| ||||| || || | ||||| | || Sbjct 919629 GAGCCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGA 919570 Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830 | | ||| || || ||| ||||| ||||||||||| || || ||||||||||| Sbjct 919569 GGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGT 919510 Query 114831 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 114890 |||| || || ||| || |||| || | || || || || | || | || Sbjct 919509 AGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCAAGGAAAC 919450 Query 114891 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGAC 114947 | || || |||||||| || || ||||| | |||| | ||| ||| | Sbjct 919449 TGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGC 919390 Query 114948 CAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCAT 115007 || |||||| || || | ||| ||| || | ||||||||||| ||||| | || | Sbjct 919389 CACCCTGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGT 919330 Query 115008 CAGATTG-GCCATTTGTCCCCCGAAT-ACGAGACTTATTGGCTCTGACATCATGGATGTG 115065 | | | ||| || || || ||| | || | |||| | || || | | Sbjct 919329 -TGCTAGTGCCGTTGGTGCCAGCAATGTAGCTAC-CAGTGGCACGGATGCGGTGAACATT 919272 Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125 | ||| || || || || ||| ||||| ||||| | |||| || ||||||| Sbjct 919271 GAGACCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGAT 919212 Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGG 115185 |||||||| || |||| | |||| |||||||| || || || ||| | || Sbjct 919211 ACCGTCGATGCTATCCTCCTTCATGTCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGG 919152 Query 115186 TGTACCAGCGTTGAAGAG 115203 || ||||||||||| || Sbjct 919151 GGTTCCAGCGTTGAACAG 919134 Score = 93.3 bits (102), Expect = 5e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| | ||||| |||||||||||||| || || |||||| || || Sbjct 146730 GGCAAAGTCGGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACC 146789 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | || || || ||||||||| Sbjct 146790 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGAT 146849 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGC 126196 ||||| || ||||| |||| |||||| Sbjct 146850 ACCCTCGACGGCGGCGAAGGCAATCAGACGC 146880 >seq76 Length=4877926 Score = 93.3 bits (102), Expect = 5e-14 Identities = 196/284 (69%), Gaps = 10/284 (4%) Strand=Plus/Minus Query 10957 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGG-TTGATTTTCACGGGCAA 11015 ||| |||| |||||| |||||||||||||||| ||| || || || | ||| || ||| Sbjct 576350 CTTTCCGATGGCGTCGATTTCATCGATGAAAATGATGCAAGGCGTGCTCTTC-CGCGCAG 576292 Query 11016 CTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGG 11075 | || | ||| || |||||| | ||| ||||| |||||||| ||||| || | || Sbjct 576291 TGGCGAACAGATCGCGTACTCTCGAAGGACCAACACCGACAAACATCTCCACGAACTCGG 576232 Query 11076 --CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAG 11133 | || | ||| | || ||| || ||| |||||||| || |||| || ||||| Sbjct 576231 AACCGCTG-ACACT-GAAGAATGGCACGCCAGATTCACCGGCAGTGGCCTTTGCAAGGAG 576174 Query 11134 GGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA-- 11191 ||||| || || || || || | |||| || ||||| ||||| | |||||| Sbjct 576173 CGTCTTACCGGTACCGGGAGGACCAGAAAGAATAGCGCCACGCGGGATTTTCGCACCAAG 576114 Query 11192 CTTCCAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCACGATTTC 11235 |||| |||| |||| | ||| |||||| |||| ||| Sbjct 576113 CTTC--TGGTAGATGCCAGGCTCTTTCAGGAAGCTGACGAATTC 576072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352741304200