Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq111 277 2e-69 >seq111 Length=3622730 Score = 277 bits (306), Expect = 2e-69 Identities = 511/737 (69%), Gaps = 12/737 (2%) Strand=Plus/Plus Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAA 93962 ||||||||||| || ||||| ||| ||| || | || || ||||| || ||| | || Sbjct 919134 CTGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGAC-ATGAA 919192 Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022 || || |||| ||| || | ||||| ||||||| ||| || | ||||| || Sbjct 919193 GGAGGATAGCATCGACGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGAC 919252 Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGG 94082 ||| || || ||||| ||| ||| ||| | | ||||||| ||| |||||| || Sbjct 919253 CGCTGGAGGCATCGGTCTCAATGTTCACCGCATCCGTGCCACTGGTAGCTACATTGCTGG 919312 Query 94083 TACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCG 94142 ||||| ||||| ||||||| | | || ||||| || |||| ||||||| | ||||| Sbjct 919313 CACCAACGGCACTAGCAACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCGCG 919372 Query 94143 CTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTG 94202 |||||| ||||||||||| | | | |||| | ||||| |||| |||||||| || Sbjct 919373 CTACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTCGAGCCATG 919432 Query 94203 GCACGCGGACG--TGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260 |||||| |||| | ||| |||| | || || || |||||||||||||| || | Sbjct 919433 GCACGCCGACGTCTTCAG--TTTCCTTGATCTTCGCAAGAACCACGGCAAGGAGGAAGTC 919490 Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320 |||| | ||||| ||||||||||||||| | || || || || |||||||| |||||| Sbjct 919491 CGGGCTCGCGACCTGTTCTACGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAG 919550 Query 94321 AAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGT 94380 | ||| | |||||| || | || ||||| || || || || ||| | || |||| | Sbjct 919551 CAGAACGGCACCTGGACCCTCATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTAT 919610 Query 94381 GGA-TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCAGGAAGG 94438 ||| || | || || | | || | | ||||| | |||| | |||| | || Sbjct 919611 GGAGACGAG-TTCGAGGCTCTTTACGAGCAGTACGAGAAGGAGGGTCGCGGCC-GTGAGA 919668 Query 94439 TTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGC 94498 | ||| |||||| ||| | || | || | ||||| ||||| |||| | Sbjct 919669 CCGTCCGCGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGGTCGAGACCGGTAACC 919728 Query 94499 CCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557 ||| ||| ||| |||||| | ||| |||| |||| |||||| || |||| || | Sbjct 919729 CCTTCATGCTGTACAAGGATCACTG-CAACCGCAAGAGCAACCAAAAGAACCTTGGTACG 919787 Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617 ||| ||||| || || ||| |||||| |||||||| ||| | || || ||| | ||| Sbjct 919788 ATCCGCAGCTCCAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCCGATGAGGTCGCT 919847 Query 94618 GTGTGTAACCTGGGCTC 94634 || || ||| ||| ||| Sbjct 919848 GTCTGCAACTTGGCCTC 919864 Score = 120 bits (132), Expect = 3e-22 Identities = 202/287 (70%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | ||||| || || ||||||||||| ||||| || |||||||| ||| |||| Sbjct 920307 AACTCTCTGCTCGTCGCACCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAAC 920366 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| || | ||| || ||| | ||| | || ||||| || || || || Sbjct 920367 GAGTGTTTCGAGCCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCTGGCGAGTTT 920426 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGA-CGTCTCTGGGTGTGTGGGGTGACAA 95267 | ||| ||||| ||||| |||| || || | || || ||||| ||| | Sbjct 920427 CAGGTCGTCAACCCCTGGCTCCTCAAGGACTTGGTCGAC-CTCGGCCTGTGGTCTGATCA 920485 Query 95268 GGTCAAGAACCAACTGCTACGCG-CCAACGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326 | | ||||||| | | ||| ||||||| || ||||| | ||||| | || || | Sbjct 920486 GATGAAGAACCGCATCAT-CGCTTCCAACGGTTCTATCCAGCAGATCCCCAACATTCCCG 920544 Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | ||||||||||||||||||||||| || |||||| | | |||||| Sbjct 920545 ACGACATCAAGGCGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCGC 920591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722488835400