Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq111 199 4e-46 seq96 149 6e-31 seq80 113 4e-20 >seq111 Length=3622730 Score = 199 bits (220), Expect = 4e-46 Identities = 815/1261 (65%), Gaps = 33/1261 (3%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || ||||||||||| |||| ||| || | | || | || ||| | | Sbjct 920439 GGTTGACGACCTGAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACG 920380 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || || | ||||| ||| || || ||| || | ||||| |||||| || | Sbjct 920379 GCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGA 920320 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCC-TGCCAATCC 153206 | | || ||| || || | |||||| ||| || |||||| ||| | ||| ||| Sbjct 920319 CGAGCAGAGAGTTGCGGATACCGTGCTGAGCAATCTCAGCCTTCA-CGCTGTCCCAGTCC 920261 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 || || | | ||||| | |||||||||||||||||| || | || || ||| ||| Sbjct 920260 CAAAGGTCGGTCGGTGCCTTGTTCCACATGTCGTACTGCAAGATGCCCTGAGAGGCAGGA 920201 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTC-GAG 153325 ||||| || || |||| || | | | | ||| || || | | || | || Sbjct 920200 CTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCA-ATCGAGGCAGTGAT 920142 Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC--GCTTCTTCGCTC 153383 | ||| ||| ||||| ||| || || | ||||| | || || || | Sbjct 920141 GGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAG--CTGCTTGGCCTCGGGGGAA 920084 Query 153384 TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 ||| | |||||||| || || ||||| ||||| ||||| | || ||| || ||||| Sbjct 920083 TCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATG 920024 Query 153444 GGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT-ATGGGATAGTGATTGCGATCGAT 153502 || || || | |||||| || || |||| | || ||||| ||| ||||| Sbjct 920023 GGGCGGTGACGCATGTTGCTCTTTCTGGC-CTCGGGCACCGGGTAGTGGTTGATGTCGAT 919965 Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562 || ||||| | ||| ||| | ||| | || | | | | ||| |||| ||| || || Sbjct 919964 GATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTA 919905 Query 153563 GGT-CATTTCGTCGACGCGTACGCA--TCGATTCACGGCAATAGACGCCAGATTACAGAC 153619 | | ||| || ||| ||| | ||| | || | || |||| || ||||| Sbjct 919904 GACACCGTTC-TCAACGTCGACGAAGGTCGGGAGA--GCCAGCGAGGCCAAGTTGCAGAC 919848 Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTAT 153679 || ||| |||| | | |||||| ||||||||| ||| |||||| || || Sbjct 919847 AGCGACCTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGAGCTGCGGAT 919788 Query 153680 GACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 || | || | || ||||| ||||| ||||| || ||| | |||||| | || Sbjct 919787 CGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGG 919728 Query 153740 TCCGCCGGTCTCGACTTGCGTTTCGACGATAA---ACCTATGCAGGTCCTGCGCTCGCAC 153796 ||||||||||| || | |||| || ||| | || | ||| || || || Sbjct 919727 GTTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAAAGC---TTCTGAGCGCGGAC 919671 Query 153797 CCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCC 153856 || || ||| ||||| ||||||| ||||||| || ||| |||||||| || Sbjct 919670 GGTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACTCGTCTCC 919611 Query 153857 GTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGT-CGG 153915 || || || || || || |||| | || ||||| || | ||| | ||| | | Sbjct 919610 ATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGCCGTTCTG 919551 Query 153916 CGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCT 153975 | | ||| ||| |||||| ||||| || | |||||| ||||| | |||||||| ||| Sbjct 919550 C-TCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCC 919492 Query 153976 TGCAATCCTCCGCGCCCATGTTGCGTTTC--AGATTGAGCACGCTATAGATGTCGGCGTG 154033 | |||||| ||| ||| || | |||| || | || ||| ||||||||| Sbjct 919491 GGACTTCCTCCTTGCCGTGGTTC--TTGCGAAGATCAAGGAAACTGAAGACGTCGGCGTG 919434 Query 154034 CCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGACGTG 154090 ||| || || | ||||| ||| | |||||| |||||| || ||||| || |||| Sbjct 919433 CCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTA 919374 Query 154091 GCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCG-GTGCCGTTGG 154149 |||| | | |||||| ||||||| | |||||| || |||| |||| |||||||||| Sbjct 919373 GCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCG-TTGCTAGTGCCGTTGG 919315 Query 154150 TCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGC 154209 | | || | ||| || ||| || | | || || || | || ||||| || Sbjct 919314 TGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGACCGATGCCTCCAG 919255 Query 154210 CGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGT 154269 || ||| || || |||||| || || |||||| |||||||||||||| | Sbjct 919254 CGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATGCTATCCT 919195 Query 154270 C 154270 | Sbjct 919194 C 919194 Score = 178 bits (196), Expect = 1e-39 Identities = 307/440 (70%), Gaps = 21/440 (5%) Strand=Plus/Minus Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466 ||||||||| |||||||| | || || |||| ||| ||| ||||||| | | Sbjct 146870 GCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTC 146811 Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526 || | | || | |||||||| || || ||| ||||||| | || || || || || Sbjct 146810 AAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAG 146751 Query 52527 GGACTGCACACGGACTTTGCGTGCCT-CTACTACAAGACGCGCGTGACCGAAAAATTGGA 52585 || ||||||| |||||||| ||||| || | | ||| || | || | || Sbjct 146750 GGCATGCACACCGACTTTGCCTGCCTGCTGTT------CTCGC---AC--ATCAAGTCGA 146702 Query 52586 TTCGGA--CACGATCCTG-----AGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGT 52638 | | | ||| ||| || || ||| ||||| || | |||||| ||||||| Sbjct 146701 AGCCCAGCCCCGAGGCTGTTGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGT 146642 Query 52639 TTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGT 52698 | | |||| |||||||| |||| || || |||||||| || | ||||||| ||| Sbjct 146641 TCCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTGCCAGT 146582 Query 52699 ACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAAC 52757 |||||||||| || ||||| || ||| ||||| |||||| || | | ||||||| |||| Sbjct 146581 ACATCGAGTTCGTCGCGGACCGCCTGCTGGTGGCGCTCGG-CAACAAGAAGTACTACAAC 146523 Query 52758 GCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTC 52817 || ||| || || || || ||| | ||||||||||| |||||||||||||| ||| Sbjct 146522 GCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTC 146463 Query 52818 GAGAAGCGAGTCGGCGAGTA 52837 |||||||| || || || || Sbjct 146462 GAGAAGCGTGTTGGTGACTA 146443 >seq96 Length=137467 Score = 149 bits (164), Expect = 6e-31 Identities = 242/344 (70%), Gaps = 16/344 (5%) Strand=Plus/Minus Query 153809 GCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGC-TCAAACTCGTCGCCGTAGCAGTCGG 153867 ||||||| | |||||| ||||||| || ||| || |||||| | ||||||||||| Sbjct 7631 GCGGCCCGTCCCCTCGTACTGCTCGTAGAG-CGCGTCGAACTCGCCCGCGTAGCAGTCGA 7573 Query 153868 CGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTC 153927 |||| |||||||||| ||| |||||||||| ||| |||| || ||| || | Sbjct 7572 CGAGCCCGGGACACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACCCGGC 7513 Query 153928 GCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAA-TCCTCC 153986 |||||||||| ||||||||||| |||||||| |||||||| ||| ||| || ||| Sbjct 7512 GCATGAACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCC-GCAGCTCATCC 7454 Query 153987 GCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATG 154046 ||| | |||| ||| ||||| | | | ||| ||||||||||| || || | | Sbjct 7453 TTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACATCGGCGTGCCACGGCTCCAGG 7394 Query 154047 TAGACGGCCAGGGCACCTTTACGCTTTCCGCCCTGATCGACGTGGCGCACCATATTGTTG 154106 |||||| | ||| || ||| | ||| || | || |||| | |||| Sbjct 7393 TAGACGACGAGGCTGCC-----GCTGGCGCCCCCGAGCCGCGCGGCG-------TCGTTG 7346 Query 154107 AAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT 154150 |||||||||| |||||| | | ||| | ||||| |||| ||| Sbjct 7345 AAGACGCGCAGCATGGGGCCGATGCCCTTGGCGGTCCCGTCGGT 7302 >seq80 Length=2705162 Score = 113 bits (124), Expect = 4e-20 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | ||||||||||| ||||||||||| Sbjct 1573460 CCACCACGCAGACGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAG 1573401 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| |||||| || || ||||| | |||| |||||||| || ||||| || Sbjct 1573400 AGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGG 1573341 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || | ||| || | ||||||| || || | Sbjct 1573340 ATACCCTCCTTGTC-CTGAATCTTGCTCTTCACGTTG-TCGATCGTGTCGGAAGATTCAA 1573283 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||| ||| | || || |||||||| || || || || ||||||||| Sbjct 1573282 CCTCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATG 1573233 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||||| || | ||| | | |||||||| |||||||||||||| Sbjct 1573233 GCCACCGCGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGA 1573174 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| |||||| || || ||||| | |||| |||||||| |||||||| || Sbjct 1573173 GAGGGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGG 1573114 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | ||||| | ||||| || Sbjct 1573113 GATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGAC 1573054 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || || || || || || || ||||| Sbjct 1573053 TTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 1573006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261686622800