Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq111 163 5e-35 >seq111 Length=3622730 Score = 163 bits (180), Expect = 5e-35 Identities = 289/418 (69%), Gaps = 5/418 (1%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| | || || |||||||| |||| ||||| Sbjct 146457 CTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTCCATGAAGTCGAAGGGGTT 146516 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| |||| ||||| ||| |||||| | ||| || || || || Sbjct 146517 GGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAGCAGGCGGTCCGCGACGAACTC 146576 Query 159769 GATGTAGCTACACATCTGC-TCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 |||||| ||||| || | || || || || || || ||||| ||||| |||| Sbjct 146577 GATGTACTGGCACATGAGCGTGGCA-TTCATGCCGAGAAGAGCGACGGGCAGCGCATCCG 146635 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887 ||| ||||||||||| || ||||| || ||| | | ||| | ||| ||| | Sbjct 146636 TCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATCCTCTCAACAGCCTCGGGGC 146695 Query 159888 CCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCT 159947 ||||| | | || || | ||||| ||||| ||||||||| ||||| |||| Sbjct 146696 TGGGCTT---CGACTTGATGTGCGAGAACAGCAGGCAGGCAAAGTCGGTGTGCATGCCCT 146752 Query 159948 CGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGA 160007 | || || ||||||| ||||||||| | | |||| || ||||||| || ||| |||| Sbjct 146753 CATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCTTCTTGA 146812 Query 160008 GCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||| || |||| || || | ||||| || ||||| ||||| ||||| || || || Sbjct 146813 GCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGATACCCTCGACGGCGGCGAAGGC 146870 Score = 132 bits (146), Expect = 8e-26 Identities = 334/496 (67%), Gaps = 10/496 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACAT 203895 || ||| || ||||||||||| |||| || |||| ||||||| | | || |||||||| Sbjct 920786 CTGGTCGACAGTGAACTGAATTGGCG--CAGCGGC-GGCCTGCGTACGGAGGTAGTACAT 920730 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||| ||||| || || || ||| || | |||||| || | | |||| || | Sbjct 920729 GCCAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATCTTGCCCATCGT 920670 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGC 204015 ||||| |||||| ||||| || || ||| ||||| ||||| | ||||||| || Sbjct 920669 AGGGTCTTTCATGTGGATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGC 920610 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGG 204074 ||||| | || ||||| ||| |||| |||||| ||||||||| | | || || || Sbjct 920609 AGCCATCTGGACGATGGTGCGCTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCT-TGA 920551 Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 ||| | || | | | | | || ||| || |||||| || || | | || Sbjct 920550 TGTCGTCGGGAATGT-TGGGGATCTGCTGGATAGAACCGTTGGAAGCGATGATGCGGTTC 920492 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || ||| || ||||| ||| | || || ||| | || |||||||| | Sbjct 920491 TTCATCTGATCAGACCACAGGCCGAGGTCGACCAAGTCCTTGAGGAGCCAGGGGTTGACG 920432 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | |||||| || || | |||||| | || | | | | ||| ||| | || ||||| Sbjct 920431 ACCTGAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGCTCGAAA 920372 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||||||| ||||| |||||| ||| ||| ||||||||||| || | |||||| Sbjct 920371 CACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGA 920312 Query 204314 GAGTTGCGCACACCGT 204329 |||||||| | ||||| Sbjct 920311 GAGTTGCGGATACCGT 920296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154056964400