Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq111 279 5e-70 seq80 140 3e-28 seq114 127 2e-24 seq115 86.0 6e-12 >seq111 Length=3622730 Score = 279 bits (308), Expect = 5e-70 Identities = 570/850 (67%), Gaps = 74/850 (9%) Strand=Plus/Plus Query 132655 GAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATC 132711 |||||| | ||| || || |||||||||| | |||||||| ||| | |||||| | Sbjct 146488 GAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGC 146547 Query 132712 AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATT 132770 | || ||||| | ||| || |||||||||||||| || ||||| | | ||| | Sbjct 146548 G---CCACCAGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTC 146604 Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830 | | || || ||| || |||||||| || || || || | |||||| |||| || Sbjct 146605 ATG-CCGAGAAGAGCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGC 146663 Query 132831 GTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATG--CTTGAAC 132888 ||| ||| ||| | ||| | | | ||| ||| || || ||| | |||| Sbjct 146664 CTCGATGATGATCCTCTCAACAGCCTCGGGGCTGGGC--TTCGACTTGATGTGCGAGAAC 146721 Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948 | || ||| ||||||||| |||| |||||| || | ||| ||||| |||||| ||| Sbjct 146722 AGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAG 146781 Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 || | ||||||||||| ||||| || |||||||| || |||| |||||| ||| Sbjct 146782 GTGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTG 146841 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068 ||||||| ||||||||||| ||||| || | ||| ||| |||| || | | ||| Sbjct 146842 AAGAAGATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGGTCGAGTTCTTG 146901 Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG------------- 133115 | |||||||||||| ||||| |||||||| |||| ||| || Sbjct 146902 TCGCAGATCCAGCGCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGGAACTATGACACGT 146961 Query 133116 --------------------CATCG--------------------TTTCGATGGCGTTCA 133135 ||||| | ||||||||||| | Sbjct 146962 TAGTGATCCATGCTCCATATCATCGTGTGGGGTCTATCATACTGTTGTCGATGGCGTTGA 147021 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACAT 133193 || | | || | | || | || ||| | ||| |||||||||||| ||| || | Sbjct 147022 AC--AGGTAGGTGCGCTGCTTGGGCTCGCTAATGTACGTGTCGATGAGGAGCGAGTAGGT 147079 Query 133194 TTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCAC 133253 |||||||| | ||||||||| ||| || |||||||| ||||| || |||||| | Sbjct 147080 CTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGAT 147139 Query 133254 CTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGG 133312 ||| || || |||| ||| |||||||| || || ||||| |||||||| || |||| Sbjct 147140 CTGGACCTC-GGAGCTGAAGCGCTCGACGAGGTTCTCGTTCACGATGCCATCCGACGCGG 147198 Query 133313 CGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC---TCCC 133369 |||| ||||| || ||||| |||||| |||||||| |||||| | |||| | || Sbjct 147199 CGAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCC 147258 Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429 ||||| | ||||||||| ||||| | |||||| | ||||| || || ||||| || | Sbjct 147259 AGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAAGAAGCCTCCGCCT 147318 Query 133430 TTTTGTACAT 133439 | |||||||| Sbjct 147319 TCTTGTACAT 147328 >seq80 Length=2705162 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| ||||||||| | || |||||| | | Sbjct 1573006 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAAGTCGAGTCATCG 1573065 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || |||| ||||| ||||| || ||| | ||||| Sbjct 1573066 GACACGATCGACAACG-TGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCA 1573124 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | |||||| || |||||||| |||| || |||||| |||||||| Sbjct 1573125 GCAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAA 1573184 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||| || ||||| |||| ||||| |||| |||||| || | || ||| Sbjct 1573185 CATTCAGAAGGAGTCGACTTTGCATCTGGTACTGCGTCTGCGCGGTGGC 1573233 Score = 129 bits (142), Expect = 6e-25 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || || ||||| |||| || || | || Sbjct 1573234 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTCC 1573293 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| || | | | | |||| || || | ||||| ||||| || ||||||| | | Sbjct 1573294 GACA-CGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTAT-CCCGCCGGATC 1573351 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || |||||||| |||| |||||| ||| ||||||| Sbjct 1573352 AGCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCTGACTACA 1573411 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| |||| ||||| |||||||| ||| || | || || Sbjct 1573412 ACATCCAAAAGGAGTCGACCCTGCACTTGGTGCTTCGTCTGCGTGGTGG 1573460 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 || ||||| ||||||||| | || |||||| || | |||| | | | | | || Sbjct 1572802 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAATGTCAAGTCG 1572861 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| ||||| || ||| | ||||| ||||| | || | ||| ||||| Sbjct 1572862 AAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 1572921 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 ||||| || || | || ||||| ||||||||||||||| ||||| |||| || || Sbjct 1572922 CAGCTTGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCGACTCTCCA 1572980 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| | || |||||| | |||||| | | | |||| | || Sbjct 1572517 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACG--TCAA 1572574 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| || || || || ||||| | || || ||||| | || | ||| || Sbjct 1572575 GAGCAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCCGG 1572634 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || || | |||||||| |||||||||||| || ||||| | || || Sbjct 1572635 CAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCT 1572694 Query 38444 GCATTTGGTGCTGCG 38458 ||| | || || || Sbjct 1572695 TCATCTCGTCCTCCG 1572709 >seq114 Length=4268993 Score = 127 bits (140), Expect = 2e-24 Identities = 140/183 (77%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 2016483 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 2016542 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || |||| ||||| ||||| |||||| | ||||| ||||| | Sbjct 2016543 GACAATG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCC 2016600 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | |||||||| ||||||||||||||| | Sbjct 2016601 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGA 2016660 Query 38431 AGG 38433 ||| Sbjct 2016661 AGG 2016663 >seq115 Length=1808013 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||| ||||| || || | ||| ||||| ||||| || Sbjct 899087 GACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 899028 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | |||||||| |||||||||||||| ||||| | || || || | |||||| Sbjct 899027 GATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTG 898968 Query 38457 CGTTTGAGAGGCGGC 38471 || || | || ||| Sbjct 898967 CGCCTGCGTGGTGGC 898953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172081001600