Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq80 196 6e-45 seq76 159 4e-34 seq74 95.1 2e-14 >seq80 Length=2705162 Score = 196 bits (216), Expect = 6e-45 Identities = 419/624 (67%), Gaps = 13/624 (2%) Strand=Plus/Minus Query 7401 TATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGA 7460 || |||| || | ||| ||||| || || | | |||||| | ||| | |||| Sbjct 1554883 TACCTTTTTTGTTTTTGCGTTTGAAGTCGTTAACGAAGTGGTTGACGAGACGGTTGTCGA 1554824 Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 | || || ||||||| ||| ||||| || || || | ||||| || ||||||||| | | Sbjct 1554823 AGTCCTCGCCACCCAGGTGAGTATCACCGGCAGTGGACTTGACCTCGAAGATACCTTCCT 1554764 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 ||||| | | | |||||||| || |||||||| || || || || || | ||||| Sbjct 1554763 CAATGGTGAGGAGGGAAACATCGAAAGTACCACCGCCAAGATCGAAGATCATGACGTTGC 1554704 Query 7581 TATC----GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | ||| ||| ||||||||||| ||||| || || || || || || Sbjct 1554703 GCTCACCAGTAGCCTT----CTTGTCGAGACCGTAGGCGATGGCAGCGGCAGTAGGCTCG 1554648 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| |||||||| || | ||||| || || || || || Sbjct 1554647 TTGATGATACGGAGGACGTTGAGGCCAGCGATGAGACCGGCATCCTTGGTAGCCTGGCGC 1554588 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || || || |||| |||| | |||||| Sbjct 1554587 TGGGAGTCGTTGAAGTAGGCGGGGACGGTAACAACAGCGTTGTTGACGGTGCCACCGAGG 1554528 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 ||||| || || | || |||| ||||| || ||||| || || || || |||| | Sbjct 1554527 TACGACTCAGCAGTCTCCCTCATCTTGGTCAGGACCATGGAAGAGATTTCCTCAGGAGTG 1554468 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATC-CGCAGCACCGGG 7875 || ||| || || ||||| || || | || | || || | | | | | Sbjct 1554467 AAAGTCTTCTCCTCGCCCTTAAACTCGACCTGGATGACAGGCTTGCCACCCTTCTC---- 1554412 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 ||| ||||| | | | | ||||||||| | ||||||| ||| ||||| | Sbjct 1554411 GATGACCTTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCGGCGTCGTTGAACTTGCG 1554352 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 || || || ||||| || || || || ||||| | |||||||||||| |||||||| Sbjct 1554351 GCCAATCAGGCGCTTGGCGTCGAAGACGGTGTTGTGGGGGTTCATGGCGACCTGGTTCTT 1554292 Query 7996 CGCCGCGTCCCCGATAAGACGTTC 8019 || | ||| ||||| | ||| || Sbjct 1554291 TGCGGAGTCACCGATCAAACGCTC 1554268 Score = 123 bits (136), Expect = 3e-23 Identities = 257/383 (67%), Gaps = 0/383 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| ||||| ||||| | || ||||| || || |||||||||||||| Sbjct 1556819 TCACCAGACAGGATAGCGGCCTGGACAGCGGCACCGTAGGCAACAGCCTCATCGGGGTTG 1556760 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || | || || | ||| | || || || ||| Sbjct 1556759 ATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGATCTTGGGG 1556700 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | ||||| || | || ||| || |||||||| | | Sbjct 1556699 ATACGGGTGGAGCCACCGACAAGGACGATCTCGTGGACGGACGACTTGTCGATCTTGGCG 1556640 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || ||||| || ||||| ||||| | |||| ||||| ||| Sbjct 1556639 TCGCGGAGGACACGCTCGACGGGCTCCATGGTAGAGCGGAAGAGGTCCTGGCACAGCTCC 1556580 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || ||||| ||||| || || || || ||||| |||| || ||| | | || || || Sbjct 1556579 TCGAAACGGGCACGAGTGATCGAGGTGTAGAAGTCAATACCCTCGAACAGGGAGTCGATC 1556520 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || || | || || || | || | || ||||| || ||||| || || || || Sbjct 1556519 TCGATCGAGGTCTGAGCAGAGCTGGACAGGGTGCGCTTGGCACGCTCGCAGGCAGTCCGC 1556460 Query 7370 AAACGACGAAGGGCACGCGGGTT 7392 | || || || ||||| | ||| Sbjct 1556459 AGGCGGCGGAGAGCACGGGCGTT 1556437 Score = 104 bits (114), Expect = 3e-17 Identities = 229/341 (67%), Gaps = 3/341 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| || | ||| || || | ||| Sbjct 2430437 TCAAAGTCCTCACCACCAAGGTGAGTGTCACCAGCGGTAGCCTGGACCTCGAAAACACCC 2430378 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA-GTAC 7575 | || | | | | |||||||| || ||||||||||| || || | | || | | Sbjct 2430377 TCGTCGACAGTAAGAATGGAAACATCGAAGGTACCACCACCAAGATCGTAGACGATGATC 2430318 Query 7576 GTTCGTATCG--TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || || | ||| | ||||| || || ||||| || | ||| || || || || Sbjct 2430317 TGGCGCTCCGACTTGTCATCCTTCTTGTCCAGGCCGTAAGCCAGAGCGGCAGCGGTGGGC 2430258 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || | | |||||| ||| || || ||||| || | || || || || || Sbjct 2430257 TCGTTCACGACACGAAGGACGTTGAGACCGGCAATGGTGCCGGCGTCCTTGGTGGCGGCA 2430198 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || | ||||| ||||||||||| ||||| ||||| |||| ||||| ||| ||| Sbjct 2430197 CGCTGAGCGTCGTTGAAGTAGGCCGGAACCGTGACGACGGCGTTGGTGACGGTCTCGCCG 2430138 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794 || || || || | || ||||| ||| | |||||||| Sbjct 2430137 AGGTAGTTCTCAGCAACCTCCTTCATCTTGCTCAGAACCAT 2430097 >seq76 Length=4877926 Score = 159 bits (176), Expect = 4e-34 Identities = 350/519 (67%), Gaps = 9/519 (2%) Strand=Plus/Minus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 ||| ||||| ||||| |||||||| |||| | ||| || | || ||| | | || Sbjct 1867890 CAGCTCCTCGAAACGAGCACGGGTGATGGTGGAGGCGAAGTCCTCACCCTCGAAGAGAGA 1867831 Query 7303 ATCAATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 || || |||| ||| || || || ||| | ||| | || ||||| || ||||| || Sbjct 1867830 GTCGATCTCAACGGTGGTCTGGGTGGCGTTGGAGAGA--GTACGCTTGGCACGCTCGCAA 1867773 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 || || | | ||||||||| ||||| |||| || ||| |||||||| ||| | Sbjct 1867772 GCGGTCCTCAGACGACGAAGAGCACGGGGGTCGCCACTAATGTCTTTCTTCGATTTTCTG 1867713 Query 7421 TTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 | ||||| | |||||| |||| | || | | ||||| || | |||||| | || Sbjct 1867712 CTGAACTCCTTCTTGAAGTGGTCGA-GAAGGTTGGTGTCGAAGTCCTGACCACCAAGATG 1867654 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||| || ||||| |||| || || | |||| | | || || Sbjct 1867653 GGTGTCACCAGCGGTGGCCTTGACGGTGAAGACGCCGCCCTGGATGTGCAGGAGGGAGAC 1867594 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC---GTCGTCTTTGTT 7596 ||| || ||||||||||| || || | ||||| |||||| | || ||| ||| Sbjct 1867593 ATCGAAAGTACCACCACCAAGATCGTAGATGAGGACGTTCCTCTCCTTCTCGGACTTGCC 1867534 Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 |||||||||| |||||||| || || || || || || || ||||| || ||| Sbjct 1867533 GGAGCCGAGACCGTAGGCGATAGCGGCGGCGGTGGGCTCGTTGATGATACGGAGGACGTT 1867474 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 |||||||| || | | || || || || || || || || ||||| |||||||| Sbjct 1867473 GAGGCCAGCGATGGAGCCGGCGTCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAGGC 1867414 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| || | ||| || | | || ||||| ||||| Sbjct 1867413 AGGGACGGTGATGACGGCCTTCTCAACCTTCTTGCCGAG 1867375 >seq74 Length=3761735 Score = 95.1 bits (104), Expect = 2e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| ||||||||||| |||| ||| || || || || || || | | ||| || ||| Sbjct 1323776 CTTCTCGAGACCGTAAGCGAGAGCGGCGGCAGTGGGCTCGTTGACGACACGGAGGACGTT 1323717 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 || ||| | || | ||||| || || ||||| || || || ||||| |||||||| Sbjct 1323716 CAAGCCGGAGATCTGACCGGCATCCTTGGTAGCTTGACGCTGGGAGTCGTTGAAGTAGGC 1323657 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776 ||||| || || || || | | |||| ||||| ||||| || | || ||| | || || Sbjct 1323656 AGGGACAGTGACAACGGCATTCTTGACGTTCTTGCCGAGGTAAGCCTCAGCGGTCTCCTT 1323597 Query 7777 CATTTTGGTAAGAAC 7791 ||| ||| ||||| Sbjct 1323596 CATCTTGCCGAGAAC 1323582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131886996600