Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq111 165 1e-35 >seq111 Length=3622730 Score = 165 bits (182), Expect = 1e-35 Identities = 364/543 (67%), Gaps = 11/543 (2%) Strand=Plus/Plus Query 111930 ATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG------G 111983 ||||| ||||||||||| | ||| ||| |||||||| || |||| | ||| | Sbjct 919338 ATTCCCATGCTTCGCGTCTACAACAACACTGCGCGCTACGTTGACCAGGGTGGCAACAAG 919397 Query 111984 CGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTC 112043 |||| ||| | |||| |||| || |||||||||||||| || || | ||| Sbjct 919398 CGTCC---GGGTGCCTTCGCCATCTACCTCGAGCCATGGCACGCCGACGTCTTCAGTTTC 919454 Query 112044 CTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCT 112103 ||||| | || ||||| || | ||||| | ||| ||||| || |||| |||| Sbjct 919455 CTTGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGGGCTCGCGACCTGTTCTACGCT 919514 Query 112104 CTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTT 112163 ||||||||||| |||||||||||||| | || ||| ||| |||| ||| | ||| | Sbjct 919515 CTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAGCAGAACGGCACCTGGACCCTCATG 919574 Query 112164 TGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTAC 112223 || || || || || || || | |||| || || ||||| || || || ||| Sbjct 919575 TGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTATGGAGACGAGTTCGAGGCTCTTTAC 919634 Query 112224 ACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAA 112282 |||||||| | || |||| | || ||| || | ||| | || | | ||| | Sbjct 919635 GAGCAGTACGAGAAGGAGGGTCGCGGCCGTGAGACCGTCCGCGCT-CAGAAGCTTTGGTA 919693 Query 112283 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTG 112342 || |||||| || | || |||||| |||| || | ||||| ||||| || ||| Sbjct 919694 CGCCATTCTCGAGGCCCAGGTCGAGACCGGTAACCCCTTCATGCTGTACAAGGATCACTG 919753 Query 112343 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGA 112402 |||| ||||| || |||||||| | ||| |||| || |||||||| || || Sbjct 919754 CAACCGCAAGAGCAACCAAAAGAACCTTGGTACGATCCGCAGCTCCAACCTTTGCTGCGA 919813 Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462 ||| | || | || | | |||||| ||||| || ||| | || || | ||||| Sbjct 919814 GATCGTCGAGTACACTGCCCCCGATGAGGTCGCTGTCTGCAACTTGGCCTCGCTGGCTCT 919873 Query 112463 CCC 112465 ||| Sbjct 919874 CCC 919876 Score = 114 bits (126), Expect = 2e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||||||||||||| || |||||| | | || | |||||||||||||| ||| Sbjct 146858 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 146799 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAA 102323 |||||||| |||||| ||||||||||||||| ||||| ||||| ||||| | ||| Sbjct 146798 CTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGGCATGCACACC 146739 Query 102324 GAGTTTGC 102331 || ||||| Sbjct 146738 GACTTTGC 146731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741507682800