Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq111 91.5 2e-13 >seq111 Length=3622730 Score = 91.5 bits (100), Expect = 2e-13 Identities = 334/517 (65%), Gaps = 16/517 (3%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| ||||| |||||||| |||||||||||||| || || |||||| ||||| Sbjct 146443 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTCCATG 146502 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099 ||||| || || || | ||||| | | | || | | | | || || Sbjct 146503 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACC------AGC 146556 Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159 || || |||| || |||| ||||||| | |||| | | ||||| |||| ||| Sbjct 146557 AGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGAAGA 146616 Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219 || || || ||| | |||| | ||||| || || || ||||| | | ||| Sbjct 146617 GCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATC 146676 Query 117220 GCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGAGCTCCACGGCAAA 117278 | | || |||| |||| || || | || | ||| ||| |||||| Sbjct 146677 CTCTCAACAGCCTCGGGGCTGGG-CTTCGACTTGATGTGCGAGAACAGCAGGCAGGCAAA 146735 Query 117279 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCAT 117338 || ||| | |||||||| ||||| || || || || |||||| || || ||||| Sbjct 146736 GTCGGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCAT 146795 Query 117339 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 117398 |||||| |||||||| | ||| | || | | ||| || ||| ||||||||||||||| Sbjct 146796 GAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGATACCCTC 146855 Query 117399 CACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATT 117457 || || || |||| || ||| ||||||| |||| |||| || | ||| Sbjct 146856 GACGGCGGCGAAGGCAATCAGACGCGATGCGAAGG-TCGAGTTCTTGTCGCAGATCCAGC 146914 Query 117458 TCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 || ||||| | |||||| ||| || || || || Sbjct 146915 GCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGGAAC 146951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979951902600