Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq111 248 2e-60 seq96 104 4e-17 >seq111 Length=3622730 Score = 248 bits (274), Expect = 2e-60 Identities = 1087/1694 (64%), Gaps = 72/1694 (4%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||| || |||| || || || ||||||||||| ||||| Sbjct 920779 ACAGTGAACTGAATTGGCGCAGCGGCGGCCTGCGTACGGAGGTAGTACATGCCAGTCTTG 920720 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| |||||| | |||||| | |||| || || | || Sbjct 920719 AGACCGAGCTT---CCAGCCAGCAAAGTGCATCGACGTGATCTTGCCCATCGTAG----- 920668 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 |||| | | |||| | ||| || || || |||||| ||||| | || Sbjct 920667 -GGTCTTTCATGTGG---------ATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCC 920618 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | || || ||||| | | ||| | ||| || |||||||| || |||||| ||| Sbjct 920617 CGATCGGCAGCCATCTGGACGATGGTGCGCTGAGAAAGCTCCCAGACCGTCTTGTAGAGC 920558 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC 212849 | |||| ||| || || | | |||||| | ||| | ||| || || | | | Sbjct 920557 GCCTTGATGTCGTCGGGAATGTTGGGGATCTGCTGGATAGAACCGTTGGAAGCGATGA-- 920500 Query 212850 TGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCT-CCAGGCACTTGACCAGGTGA 212906 ||| | ||| | || ||| ||||| |||| ||| | ||||| || Sbjct 920499 TGCGGTTCTTCATCTGATCAGACCACAGGCCGA-GGTCGACCAAGTCCTTGAGGAGCCAG 920441 Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | ||| || || || | ||||| | | ||| | ||| || ||||| Sbjct 920440 GGGTTGACGACCTGAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTAC 920381 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| | ||||||| || || ||||| || ||| ||||||||||| || Sbjct 920380 GGCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCG 920321 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATG--AGGCGCCGAAGCTCTGCCCAGT 213084 || || ||| ||| | | ||||||| | || || | | | ||| | |||||| Sbjct 920320 ACGAGCAGAGAGTTGCGGATACCGTGCTGAGCAATCTCAGCCTTC-ACGCTGT-CCCAGT 920263 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| | | | | ||| | ||| |||||||||||| ||||||||||||| | Sbjct 920262 CCCAAAGGTCGGTC-GGTGC-----CTT---GTTCCACATGTCGTACTGCAAGATGCCCT 920212 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 | || ||||||||| | | |||||| ||||| |||||| || || | Sbjct 920211 GAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAATCG 920152 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || | || || | ||||||||| || || |||| ||||||||| |||||||| Sbjct 920151 AGGCAGTGATGGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCT 920092 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | ||||| ||| ||||| | |||| |||| || || || | ||| || | Sbjct 920091 CGGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCA 920032 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGC 213384 ||||||| | ||| | || ||| ||| | ||| || ||||| |||| Sbjct 920031 CTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGA 919972 Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444 ||||||||||||||| | ||| | ||| | ||| || | | || | || Sbjct 919971 TGTCGATGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCT--- 919915 Query 213445 GATTGAACACGTAGCCCCCGTCCTGCACAA--ACTCAGGCAGGGCGATGCTG----GCCA 213498 |||| ||||| | |||| || || || ||| ||| || | | |||| Sbjct 919914 ---TGAAGTCGTAGACACCGTTCTCAACGTCGACGAAGGTCGGGAGAGCCAGCGAGGCCA 919858 Query 213499 GGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGC 213558 |||||| || || ||||| | | | | |||||||| | ||||||| ||| |||||| Sbjct 919857 AGTTGCAGACAGCGACCTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGG 919798 Query 213559 TGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAG 213617 || ||||| || || ||||||| ||||| ||| ||| | |||| ||||||||| Sbjct 919797 AGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTT-GCGGTTGCAGTGATCCTTGTAC 919739 Query 213618 AGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTG 213677 |||||| ||||| |||||||| | ||||| | | || || | ||| || | | Sbjct 919738 AGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAAAGCTTCTGA 919679 Query 213678 GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTT 213736 || ||| | || || || || | | ||||||||| ||||| || | | Sbjct 919678 GCGCGGACG----GTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTC 919623 Query 213737 GAATTCGTGGCCCCAGACC-CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCC 213795 ||| |||| || | || ||| |||| ||||| || ||| ||||||||| ||| Sbjct 919622 GAACTCGTCTCCATAAACATCTG-CCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCC 919564 Query 213796 AGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAAC 213854 || |||| | ||| ||| | | |||||| || || || | ||| || ||| |||| Sbjct 919563 AGGTGCCGTTCTGCTC-GACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 919505 Query 213855 AGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAG 213914 ||||| | | || || ||| || ||| ||||| ||||| || || ||| Sbjct 919504 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCAAGGAAACTGAAG 919445 Query 213915 ATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCC 213971 | ||| |||||||| ||||| | ||||||||| ||||| ||||| | |||| || ||| Sbjct 919444 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 919385 Query 213972 TGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG-A 214030 ||||| || | || ||||| ||| ||| || | ||| | || |||||| | Sbjct 919384 TGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTA 919325 Query 214031 CTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGT--TGCTCATGGAGAGC 214088 || |||||||| || || || || || | ||| | | | || ||| |||| Sbjct 919324 GTG-CCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGA-- 919268 Query 214089 CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCG 214148 || ||||| || ||| ||||||||||||||||||| | | | || || ||| ||| Sbjct 919267 CCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCG 919208 Query 214149 GCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG 214208 | ||||| || || | | || | | |||||| || | ||| ||| ||| | Sbjct 919207 TCGATGCTATCCTCCTTCATGTCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGGGGTT 919148 Query 214209 CCAGAGTTGAAAAG 214222 |||| |||||| || Sbjct 919147 CCAGCGTTGAACAG 919134 Score = 241 bits (266), Expect = 2e-58 Identities = 369/521 (71%), Gaps = 19/521 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | ||| |||||||| Sbjct 146439 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTC 146498 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||||| | ||| || | | ||| ||| | | ||||| Sbjct 146499 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTT--GCCGAGCGCCACCAGC 146556 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 ||| | ||||||||| |||||||||| | ||||||| ||| |||||||| | || Sbjct 146557 AGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGAAGA 146616 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 | ||||||| || | || || ||||||||||| || | || || || | ||| Sbjct 146617 GCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATC 146676 Query 48077 TGCTTAACG----CGGGACTCTGAGGGTTTG--TTGCGCAGGTGCTTGGCATAGAGCATG 48130 || ||| |||| || || || | ||| | |||| | | |||| | Sbjct 146677 CTCTCAACAGCCTCGGGGCTG---GGCTTCGACTTG---ATGTGCGAGA---ACAGCAGG 146727 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||||| ||| || || ||| ||||||| ||||||||||| |||| Sbjct 146728 CAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGA 146787 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||||| || | || ||||||||||| || | ||||| ||||| ||||||| Sbjct 146788 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAG 146847 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||| || | || | | | |||| | | ||||||||| || Sbjct 146848 ATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGGTCGAGTTCTTGTCGCAG 146907 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||||| || |||||||| |||||| |||||||||| || Sbjct 146908 ATCCAGCGCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGG 146948 >seq96 Length=137467 Score = 104 bits (114), Expect = 4e-17 Identities = 164/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 213712 CCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCA---GTCCCG 213768 |||||||||| ||||||||| ||| ||| ||| ||| | | ||| | | || | Sbjct 7620 CCTCGTACTGCTCGTAGAGCGCGTCGAACTCG---CCCGCGTAGCAGTCGACGAGCCCGG 7564 Query 213769 GACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACA 213828 |||| || || ||||| || ||||||| ||||| | ||| | ||||||||| Sbjct 7563 GACACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACCCGGCGCATGAACA 7504 Query 213829 GGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGT 213888 ||||||| |||||||||||| | |||||| | | || | ||| ||| || | Sbjct 7503 GGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCCGCAGCTCATCCTTGCCGCCGC 7444 Query 213889 TTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGA 213942 | || ||| | || |||||||||| || |||||||||||||||| ||||| Sbjct 7443 TGCGGCCCAGGTTGAGGAAGTCAAAGACATCGGCGTGCCACGGCTCCAGGTAGA 7390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531460921600