Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq111 91.5 2e-13 seq76 86.0 7e-12 >seq111 Length=3622730 Score = 91.5 bits (100), Expect = 2e-13 Identities = 334/517 (65%), Gaps = 16/517 (3%) Strand=Plus/Minus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCG 65066 || || || || ||| |||||| | ||||| || ||| | || |||| |||| Sbjct 146951 GTTCCCTGCATCAAGAGGAAGGCCGACTGGGCTCTGCGCTGGATCTGCGACAAGAACTCG 146892 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 ||||||| ||| || |||| || || || ||||||||||||||| ||| || Sbjct 146891 A-CCTTCGCATCGCGTCTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTC 146833 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 ||| | | || | ||| | |||||||| ||||||||||| || || |||||| || Sbjct 146832 CTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAA 146773 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG-A 65245 || || || ||||| |||||||| | ||| || |||||| ||| ||| | | Sbjct 146772 CGAGCTCATCTCCCGTGATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCA 146713 Query 65246 CTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 | | || || |||| |||| || | | ||| | | ||||| || || | Sbjct 146712 CATCAAGTCGAAG-CCCAGCCCCGAGGCTGTTGAGAGGATCATCATCGAGGCTGTCGATA 146654 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365 | ||||| | |||| | ||| || || || ||| |||| ||||| | | Sbjct 146653 TCGAGAAGGAGTTCCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACGC 146594 Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCA 65424 |||| | ||||||| |||| || |||| || || || || | | | | || Sbjct 146593 TCATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCT------GGTGGCGCTCGGCA 146540 Query 65425 CCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATG 65479 | | | ||||| | || || || ||||| ||||| |||||| || | Sbjct 146539 ACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCG 146480 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | |||||||||||||| |||||||| ||||| ||||| Sbjct 146479 GCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 146443 >seq76 Length=4877926 Score = 86.0 bits (94), Expect = 7e-12 Identities = 219/327 (67%), Gaps = 21/327 (6%) Strand=Plus/Plus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||| || ||||| || ||||| |||| | ||| || ||||| || ||||| || Sbjct 576116 TGGTGCGAAAATCCCGCGTGGCGCTATTCTTTCTGGTCCTCCCGGTACCGGTAAGACGCT 576175 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CA 175392 ||| || |||| || |||||||| || |||||| || |||| || || | | Sbjct 576176 CCTTGCAAAGGCCACTGCCGGTGAATCTGGCGTGCCATTCTTC-AGTG-TCAGCGGTTCC 576233 Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452 | || |||||||||||||| ||||| ||| | || || |||||||| || | | Sbjct 576234 GAGTTCGTGGAGATGTTTGTCGGTGTTGGTCCTTCGAGAGTACGCGATCTGTTCGCCACT 576293 Query 175453 GCCCGCGAAAATCA-ACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG-C 175510 || || ||| | || || || || | ||||| ||||| || || || | || ||| | Sbjct 576294 GCGCG-GAAGAGCACGCCTTGCATCATTTTCATCGATGAAATCGACGCCATCGGAAAGTC 576352 Query 175511 AA--------CGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAA 175562 || | ||| ||||||| | || |||||||||||| || | || Sbjct 576353 AAGAGCCAAGCAAAGCTTTGGTGGT------GGCAACGACGAGAGAGAAAGCACGCTGAA 576406 Query 175563 TCAACTACTCACCGAGATGGATGGCTT 175589 || | || |||||||||||||| || Sbjct 576407 CCAGATTCTGACCGAGATGGATGGGTT 576433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568742431200