Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq80 214 2e-50 seq76 174 2e-38 seq114 131 2e-25 >seq80 Length=2705162 Score = 214 bits (236), Expect = 2e-50 Identities = 397/577 (69%), Gaps = 13/577 (2%) Strand=Plus/Plus Query 195416 ACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATC 195475 ||||| | || ||| | | || || ||||||| || ||| || |||||||| | Sbjct 1554259 ACAGACACCGAGCGTTTGATCGGTGACTCCGCAAAGAACCAGGTCGCCATGAACCCCCAC 1554318 Query 195476 AATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAA 195535 || || ||||| ||||| ||||| || ||||| |||||||| || | ||||| Sbjct 1554319 AACACCGTCTTCGACGCCAAGCGCCTGATTGGCCGCAAGTTCAACGACGCCGAGGTCCAG 1554378 Query 195536 GACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCG--GTGTGGCTGATAAGCCTATGA 195593 | |||||| ||| ||| | | | ||| | || | | ||||| |||||| | | Sbjct 1554379 GCCGATATGAAGCACTTCCCCT-TCAAGGTCATCGAGAAGGGTGGC----AAGCCTGTCA 1554433 Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGG 195653 | | || || ||| | || ||| |||| || |||| || ||||| || || |||| Sbjct 1554434 TCCAGGTCGAGTTTAAGGGCGAGGAGAAGACTTTCACTCCTGAGGAAATCTCTTCCATGG 1554493 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713 | ||| ||||||| ||||||||| || || | | | ||| || || || | || | Sbjct 1554494 TCCTGACCAAGATGAGGGAGACTGCTGAGTCGTACCTCGGTGGCACCGTCAACAACGCTG 1554553 Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 |||| || || || || ||||||| || || || || ||||| || ||||| || | | Sbjct 1554554 TTGTTACCGTCCCCGCCTACTTCAACGACTCCCAGCGCCAGGCTACCAAGGATGCCGGTC 1554613 Query 195774 CTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTT 195833 || || || || ||| || | || ||||| || || || || ||||| || || | Sbjct 1554614 TCATCGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATCGCCT 1554673 Query 195834 ATGGTCTGGACAAGAACAAGG--AC-GAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 | ||||| |||||||| || || | || || || ||||||| ||||| || | Sbjct 1554674 ACGGTCTCGACAAGAA---GGCTACTGGTGAGCGCAACGTCATGATCTTCGATCTTGGCG 1554730 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 ||||||| || ||||| || || |||| ||||| | ||||| ||||| || ||| | | Sbjct 1554731 GTGGTACTTTCGATGTTTCCCTCCTCACCATTGAGGAAGGTATCTTCGAGGTCAAGTCCA 1554790 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| ||||||||||| || ||||| || || ||||| Sbjct 1554791 CTGCCGGTGATACTCACCTGGGTGGCGAGGACTTCGA 1554827 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| |||||||| |||||||| ||||||||||| || || Sbjct 1573234 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTCC 1573293 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || ||||||||| || ||||| || || || || |||||| Sbjct 1573294 GACACGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCGGATCAG 1573353 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || |||||||| ||||| || || || || || ||| |||| |||||| Sbjct 1573354 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCTGACTACAAC 1573413 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | ||||||||||| || || ||| | || || | || || ||||| Sbjct 1573414 ATCCAAAAGGAGTCGACCCTGCACTTGGTGCTTCGTCTGCGTGGTGG 1573460 Score = 176 bits (194), Expect = 6e-39 Identities = 178/232 (77%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || ||||| || || || || |||||||| || || |||| Sbjct 1573001 GTGGTATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAAGTCGAGT 1573060 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| | || ||||||| ||||| ||||| ||||| || || | Sbjct 1573061 CATCGGACACGATCGACAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGG 1573120 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || || || ||||| ||||| || || || ||||||||| | || | Sbjct 1573121 ACCAGCAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACT 1573180 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| |||| |||||||| ||| | || || || || | || || ||||| Sbjct 1573181 ACAACATTCAGAAGGAGTCGACTTTGCATCTGGTACTGCGTCTGCGCGGTGG 1573232 Score = 165 bits (182), Expect = 1e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||| ||||| |||||||| ||||| ||||| ||| |||| | Sbjct 1572519 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAGAGC 1572578 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || ||||||||||||||||| || |||||||| || | || || || || || Sbjct 1572579 AAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCCGGCAAG 1572638 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||||||||| || ||||| | || |||||| |||| |||||||| || || || Sbjct 1572639 CAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTTCAT 1572698 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 1572699 CTCGTCCTCCGCCTCCGCGGTGGT 1572722 >seq76 Length=4877926 Score = 174 bits (192), Expect = 2e-38 Identities = 471/718 (66%), Gaps = 7/718 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || ||||| ||||||| || || || ||||| || |||||||| | | || Sbjct 1867405 ACCGTCCCTGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGACGCCGGCTCCATC 1867464 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || ||||| || || || || || || || || || ||| Sbjct 1867465 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCCGCTATCGCCTACGGT 1867524 Query 195839 CTGGACAAGAACAAGGACGAA---GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| ||| || | || || | |||| ||||| ||||||||| Sbjct 1867525 CTCGGCTCCGGCAAGTCCGAGAAGGAGAGGAACGTCCTCATCTACGATCTTGGTGGTGGT 1867584 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| || || | || | || || | ||| || ||||| || ||| Sbjct 1867585 ACTTTCGATGTCTCCCTCCTGCACATCCAGGGCGGCGTCTTCACCGTCAAGGCCACCGCT 1867644 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGAT 196015 ||||| || ||||| |||||| | || ||||| | |||||| || || | Sbjct 1867645 GGTGACACCCATCTTGGTGGTCAGGACTTCGACACCAACCTTCTCGACCACTTCAAGAAG 1867704 Query 196016 GAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTT 196075 |||||| | |||| |||||||| ||| ||| | || | ||||||||||| || Sbjct 1867705 GAGTTCAGCAGAAAATCGAAGAAAGACATTAGTGGCGACCCCCGTGCTCTTCGTCGTCTG 1867764 Query 196076 AGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAATGGTTG 196133 ||||| || || || |||||||| || |||||||| | ||| | || || | |||| Sbjct 1867765 AGGACCGCTTGCGAGCGTGCCAAGCGTACTCTCTC--CAACGCCACCCAGACCACCGTTG 1867822 Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193 |||| || || | || || || |||||| | || || |||||||| ||||| | Sbjct 1867823 AGATCGACTCTCTCTTCGAGGGTGAGGACTTCGCCTCCACCATCACCCGTGCTCGTTTCG 1867882 Query 196194 AAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTG 196253 | ||| | ||| | || || | | | || || || || || ||| | Sbjct 1867883 AGGAGCTGAACGGCAAGGCCTTCAGCGGCACTCTCGCTCCCGTCGAGCAGGTCCTTAAGG 1867942 Query 196254 ACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTA 196313 | || | || || ||| ||||| || || || |||||||| || || || ||||||| Sbjct 1867943 ATGCTAGCATCGAGAAGAACAAGGTCGACGAGATCGTCCTTGTCGGTGGTTCCACCCGTA 1868002 Query 196314 TTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGA 196373 | || || || || | ||| ||||||||| || | | | || | | Sbjct 1868003 TCCCCCGTATCCAGAAGCTCCTTAGCGACTTCTTCAACGGCAAGAAGCTCGAGAAGAGCA 1868062 Query 196374 TCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 ||||||| ||||| || ||||| |||||||| || || || || | ||| ||||| || Sbjct 1868063 TCAACCCCGATGAGGCCGTTGCCTATGGTGCCGCTGTCCAAGCCGGTATCCTCTCCGG 1868120 >seq114 Length=4268993 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| || || ||||| || || || || |||||||||||||| ||||| || ||||| || Sbjct 2016482 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 2016541 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| || |||| |||||| || || ||||| |||||||| || || ||||| || || Sbjct 2016542 CGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 2016601 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || ||||| || ||||| || ||||| | || |||||| | || || Sbjct 2016602 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 2016661 Query 172050 GG 172051 || Sbjct 2016662 GG 2016663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861454322800