Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq86 214 2e-49 seq111 187 3e-41 seq74 145 9e-29 seq114 114 2e-19 seq84 114 2e-19 seq106 98.7 1e-14 seq96 91.5 2e-12 >seq86 Length=1372250 Score = 214 bits (236), Expect = 2e-49 Identities = 347/491 (71%), Gaps = 10/491 (2%) Strand=Plus/Minus Query 1852166 GCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCG 1852225 ||||| ||||| | ||| || || || |||||| | || || | | || ||||||| Sbjct 711972 GCAAAAATCTTCCTCTGATCCACGCCACCGAACTGGACATCCACACCCAAGTACTGCTCG 711913 Query 1852226 TCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTG-CGGTCCATCTT 1852284 ||||||||||||||||||||||||| || | | ||| ||||||||| | ||| ||| Sbjct 711912 TCGAGGGCCTGCATGAGCGGGTAGATCAGGCCGGACAGCAGCGGGTTGTCCGTCTG-CTT 711854 Query 1852285 GACCACCTGAGCGGCGGC-CTTTTG-CGCCGTGC-CGGTGCGCACG-TGCGCCGCGAGTC 1852340 ||| |||| || |||| || ||| || ||||| ||||| || | ||| | || | Sbjct 711853 GACGACCTCGGCACCGGCTCTCTTGGCGTCGTGCTCGGTGGTCATGGTGCTC----AGGC 711798 Query 1852341 GGTAGAGGTCGAGCGCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCACAAACTCGA 1852400 | ||||| | | |||| ||| |||||||||| | ||| |||| ||||||| Sbjct 711797 GCAGCAGGTCCATCATGTAGTTTTCGCTCTTCTGGTACTCGCTTCCGAGCACGAACTCGA 711738 Query 1852401 GTCCGCCCAGCGGCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGC 1852460 | | | | | || |||||||| | || |||| | ||||| || ||| ||| | Sbjct 711737 GGCGGTCGACCGACACGCCGACGGCCTTGAGCGACTCGGTGATGACATACTTGTAGTACT 711678 Query 1852461 GGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCACGT 1852520 | |||| | |||||| || |||| |||| |||||| ||| |||||| | || Sbjct 711677 TGGCGCGGTAGTTGACCAGCTCAATGGGCGCCTTGAGGTTGTCCAGGAAGGCGTGGATGT 711618 Query 1852521 CGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATGG 1852580 |||| | ||||||||||| | ||||| ||||| || || | || | |||| |||| Sbjct 711617 CGGCCAGCAGGATCTTGACATGGCAGCCCGCCTGCAGGAACTGCGCGATCTTGAGCATGG 711558 Query 1852581 GCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATATGATCAGGG 1852640 ||||||||||||| |||||| ||||||| | |||||||||||| || ||| ||| | Sbjct 711557 GCACAAAGTAGCCGCAGTGCGGCCTGCCCGTGGTCGCCGTGCCCCAGTAGATGCGCAGCG 711498 Query 1852641 GGCGCTCGGCC 1852651 | |||||| || Sbjct 711497 GCCGCTCGCCC 711487 >seq111 Length=3622730 Score = 187 bits (206), Expect = 3e-41 Identities = 234/317 (74%), Gaps = 8/317 (3%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||||| || Sbjct 146434 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATG 146493 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||| ||| | | ||||||| | | Sbjct 146494 TTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACC 146553 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||||||||||||||||||||| ||| |||||||||| Sbjct 146554 AGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGA 146613 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || ||||||| || ||| ||||| |||||||| ||||| ||||||| |||| Sbjct 146614 AGAGCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATG 146673 Query 868931 ATCTGCCTGGGCA-CGTCGGCCGAGGGCTTG---TTGACGAGCATCGTGTAGAGCAGGCA 868986 ||| | | || | |||| |||||| |||| | || | | | |||||||| Sbjct 146674 ATCCTC-TCAACAGCCTCGGGGCTGGGCTTCGACTTGATGTGC---GAGAACAGCAGGCA 146729 Query 868987 GGCAAAGTCGCAGTGCA 869003 |||||||||| ||||| Sbjct 146730 GGCAAAGTCGGTGTGCA 146746 Score = 131 bits (144), Expect = 2e-24 Identities = 181/253 (72%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || ||||||||||||||| ||| | |||| | | | Sbjct 147082 CCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCT 147141 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 ||||||| |||| || || | ||||||||| ||||||||| || ||||||| Sbjct 147142 GGACCTCGGAGCTGAAGCGCTCGACGAGGTTCTCGTTCACGATGCCATCCGACGCGGCGA 147201 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA---GCGACACCCAGT 869807 | || || || ||||| ||| ||| ||||||||||||| ||| || ||||| Sbjct 147202 AGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGT 147261 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | | ||| | |||||| | |||||| || ||||||| || ||||| ||||| | Sbjct 147262 CGTGGAGGTCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAAGAAGCCTCCGCCTTCT 147321 Query 869868 TGTACATCTCCCA 869880 ||||||||| ||| Sbjct 147322 TGTACATCTGCCA 147334 Score = 125 bits (138), Expect = 9e-23 Identities = 127/163 (78%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 19040 CCAAGAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCT 19099 |||| |||||||||| ||||||||||||| |||||| || ||||| || | || || Sbjct 1008047 CCAACAGGACAGCATTGGCGGCACGGTGAGCTGCGTGATACGGAACGTTCCTTCCGGTCT 1008106 Query 19100 CGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCC 19159 || ||||| ||||| |||||| |||||||| ||| || || |||||||| || || Sbjct 1008107 TGGTGAGCCCTGCTTCGACAAGCTCGAGGCCATGCTTGCGCATGCCATGCTCAGCATTCC 1008166 Query 19160 GGCCACCAAGGGATTCGAGATTGGCAGCGGGTTT--GCGGGTG 19200 ||||| ||||| ||||| ||||| | ||||||| ||||||| Sbjct 1008167 CGCCACAAAGGGCTTCGATATTGG-ATCGGGTTTCGGCGGGTG 1008208 Score = 118 bits (130), Expect = 1e-20 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||||||||| |||| ||| ||||||| |||||||| | | ||||||| Sbjct 919385 CTGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCT 919326 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||||||| || | |||| || | ||| || | ||| | | || Sbjct 919325 AGTGCCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGACC 919266 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| || || | ||||||||| | ||||| ||||| ||||||||||| || || Sbjct 919265 GATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 919206 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACG 1630282 ||| || |||||||||| | ||| ||||| |||| Sbjct 919205 GATGCTATCCTCCTTCATGTCGATGAGGAAGCAAGACG 919168 Score = 109 bits (120), Expect = 7e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 18093 CACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTG 18152 || || ||||||||||||| | ||| |||||||| |||| ||| ||||| | Sbjct 1007372 CAGCTATGGCGAGTCGCACTGCCTCTCCGTGGGCTGCATTGTCGATGGCTGCCCGCCAGG 1007431 Query 18153 CATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGG 18212 ||||| || |||||||||| |||||||| ||| || || || || ||||| ||| | Sbjct 1007432 CATGCAGCTCACCGAGGCCGATATCCAGCCCCAGATGACCCGCCGTCGCCCGGGTCAGAG 1007491 Query 18213 CGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAA 18272 |||| | | || ||||| ||||| || || || |||||||||||||| ||| Sbjct 1007492 CGCAATCACGACCCCGCGAAACGAAAAGGACCGGGTGGAGATCCAGTCGGGCACCGAGTT 1007551 Query 18273 CGGCCTCACGCTCGGCTCGCCCGTCGGC 18300 ||| | ||||| || ||||| ||||| Sbjct 1007552 TGGCGTGACGCTGGGTACGCCCATCGGC 1007579 Score = 107 bits (118), Expect = 2e-17 Identities = 127/170 (75%), Gaps = 9/170 (5%) Strand=Plus/Plus Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAG 869260 |||||| |||| ||| ||||||||||| ||||||||||||||||| ||||||| | | Sbjct 146770 TCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCG 146829 Query 869261 AAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAG 869320 || ||| ||| ||||| |||||||||||||| ||| | || || ||| || ||| Sbjct 146830 AAGGAGCCGCTGAAGAAGATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAG 146889 Query 869321 GTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTCGGCCTT 869367 |||||| | ||||| |||||| || |||||||||||||| Sbjct 146890 --GTCGAG----TTCTTGTCGCAGATCCAGCGCAGAGCCCAGTCGGCCTT 146933 Score = 96.9 bits (106), Expect = 4e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| ||||| ||| |||| || ||||| || |||||||| |||||| |||||||| Sbjct 919538 CATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTT 919479 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 |||||||||||| || || || | || | |||||||||||| ||||| ||||| Sbjct 919478 GCCGTGGTTCTTGCGAAGATCAAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTA 919419 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 | ||| ||||| ||| |||||| ||| || Sbjct 919418 GATGGCGAAGGCACCCGGACGCTTGTTGCCACC 919386 >seq74 Length=3761735 Score = 145 bits (160), Expect = 9e-29 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||||||||||||| |||| |||||| | || |||||| | || |||||| Sbjct 2497268 GCCGCCAACTACCTCGACATCAAGGCTCTTCTCGATGTCGGCTGCAAGACCGTCGCCAAC 2497327 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || || ||||||||||||||||| |||||| || ||| Sbjct 2497328 ATGATCAAGGGCAAGTCCCCTGACGAGATCCGCAAGACCTTCAACATCCAGAACG 2497382 >seq114 Length=4268993 Score = 114 bits (126), Expect = 2e-19 Identities = 308/461 (67%), Gaps = 14/461 (3%) Strand=Plus/Minus Query 1726698 CGGCGCGCACGGCGTCGAGTGCCGTCGCC-ACGCTCCCGTCGGTGCCGTTCTTGAAGCCG 1726756 |||||| | |||||||| || | |||| | ||| ||||||||||||||||||||||| Sbjct 4171964 CGGCGCCAATGGCGTCGACGGC-GACGCCCAGGCTACCGTCGGTGCCGTTCTTGAAGCCA 4171906 Query 1726757 ATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGCGCG 1726816 |||| | ||| | || |||| ||| ||||||| |||| |||||| || || ||| Sbjct 4171905 ATGGGGTAGGACAGACCGGAGGCCAGCTCACGGTGCAACTGGGACTCGGTGGTACGTGCG 4171846 Query 1726817 CCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAA-GGGGCCACCAGAGGACTGAGAAA 1726875 || | ||| ||| || | |||||| | | | ||||| | | | | ||| | Sbjct 4171845 CCAATGGCACCCAGCGAGATCAGGTCGGAGAGGAACTGGGGCGAGATGGTGTC-GAGCAT 4171787 Query 1726876 CTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGGCGGCGCGA--C 1726933 |||| ||| | |||| || | | | || || |||| | || ||||| | Sbjct 4171786 CTCGCTGGCGATGGGC--ATGCCCTG-GCCGGTCAGGTCGCAGTAGAGCTTACGCGAGAC 4171730 Query 1726934 GCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCC 1726993 || | ||||| | | | | | | |||| | ||| |||||| || |||||| Sbjct 4171729 GCGG--AGGCCCTTGTTGATCTTGTAGCTCTCGTCCATGTCCGGGTCGTTGATTAGGCCC 4171672 Query 1726994 TTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACGCAAAGCGCG 1727053 ||||| ||||| || ||||| ||||| |||| ||||||||||||| | ||| ||| || Sbjct 4171671 TTCCAGCCGACCGTGGTGCGGGGCTTCTCGAGGTAGGCGCGCATGATGATGCACAGCTCG 4171612 Query 1727054 TCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGCGTCGGCCATAGTCGACGACGGCCGCC 1727113 | | | || ||| | | | ||| ||||| ||| || |||||| ||| | | Sbjct 4171611 TTGTTCAGCTTGTC---GGCCAGGGCCTTGAGGCGCTGGCAGTACTCGACGGCGGTCTCG 4171555 Query 1727114 GGGTCGTGCGCCGAACACGGACCAACGATAACCAGCAGCCG 1727154 |||||||| || || || || || || |||||||| || Sbjct 4171554 GGGTCGTGGATGGAGCAGGGGCCGACCATGACCAGCAGGCG 4171514 >seq84 Length=2904622 Score = 114 bits (126), Expect = 2e-19 Identities = 147/198 (74%), Gaps = 5/198 (3%) Strand=Plus/Plus Query 733054 TCAAGATCGTGACGCGCGCCATGCGCCAGCCCGAGTTGGGCGACAAACTGTCGTCGCGCC 733113 |||||||| |||||| | ||| | ||||||| |||||||||| | |||||||| | Sbjct 2783366 TCAAGATCCAGACGCGGCAAACGCGGCGGCCCGAGCTGGGCGACAAGTTCTCGTCGCGGC 2783425 Query 733114 ACGGCCAAAAGGGCACCGTGGGCAGCGTGCGCTCCACCGA-GGACATGCCCTGGTCGCCG 733172 |||| ||||||||| ||| |||| | | ||| | || ||||||||| | || || Sbjct 2783426 ACGGGCAAAAGGGCGTCGTCGGCATCAT-CGCCGAGCAGACGGACATGCCGT--TCAACG 2783482 Query 733173 CGCGGCGGCGCCACGCCCGACATCGTGATCAACCCGCACGCCATCCCGTCGCGCATGACC 733232 | ||| | || |||||| | || |||||||||| | |||||||||||||||| Sbjct 2783483 ACCAA-GGCATCTGCCCGGACATCATCATGAACCCGCACGGCTTCCCGTCGCGCATGACG 2783541 Query 733233 ATGGGCAAGATGCTCGAG 733250 ||||||||||||| ||| Sbjct 2783542 GTGGGCAAGATGCTGGAG 2783559 >seq106 Length=1498104 Score = 98.7 bits (108), Expect = 1e-14 Identities = 93/116 (80%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGC 1726792 ||||||||||||||||||||||||| | | | ||| | || || | ||| |||||| Sbjct 1289917 CCGTCGGTGCCGTTCTTGAAGCCGACAGGGAAGGACAGGCCGGAGGCAAGCTCACGGTGC 1289976 Query 1726793 ACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCC-CACGCCACCAGGTCTGCCA 1726847 | |||||||||||||| |||||||||||||||||| ||| || ||| || |||| Sbjct 1289977 AGTTGGCTCTCGGTCGTCCGCGCGCCCACGGCGCCCACAC-TCAGCAGATCGGCCA 1290031 >seq96 Length=137467 Score = 91.5 bits (100), Expect = 2e-12 Identities = 140/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 1628375 CGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACC-- 1628432 ||||||| ||| || ||||| ||||| ||| || | |||| ||||||||| | Sbjct 7584 CGTAGCAGTCGACGAGCCCGGGACACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCT 7525 Query 1628433 GGTC-ACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCG 1628491 |||| ||| |||||||| || ||||| | |||||| ||||| |||||||| | Sbjct 7524 GGTCGACC---CGGCGCATGAACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTG 7468 Query 1628492 CCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGT 1628551 |||| ||| ||||||||| | | |||| ||| |||| | | ||||||| Sbjct 7467 CCCGCAGCTCATCCTTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACATCGGCGT 7408 Query 1628552 GCCACGGCTCCAGGTAG 1628568 ||||||||||||||||| Sbjct 7407 GCCACGGCTCCAGGTAG 7391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107129762561455