Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq86 203 5e-46 seq111 187 4e-41 seq74 136 6e-26 seq96 120 5e-21 seq84 120 5e-21 seq106 102 1e-15 >seq86 Length=1372250 Score = 203 bits (224), Expect = 5e-46 Identities = 367/525 (70%), Gaps = 10/525 (2%) Strand=Plus/Minus Query 2411475 GTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCC 2411534 |||||||||| ||||| || ||| | ||||| ||||| | ||| || || Sbjct 712006 GTAGCCCAGCTTCGGCAACGCCTCCTTCGCCAGCGCAAAAATCTTCCTCTGATCCACGCC 711947 Query 2411535 GCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAC 2411594 || |||||| | || || | | || |||||||||||||||||||||||||||||||| Sbjct 711946 ACCGAACTGGACATCCACACCCAAGTACTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAT 711887 Query 2411595 GAGGTTGCTGAGCGGCGGGTTG-CGGTCCATCTTGACCACCTGGGCGGCGGC-CTTTTG- 2411651 ||| | ||| |||||||| | ||| |||||| |||| ||| |||| || ||| Sbjct 711886 CAGGCCGGACAGCAGCGGGTTGTCCGTCTG-CTTGACGACCTCGGCACCGGCTCTCTTGG 711828 Query 2411652 CGCCGTGC-CGACGGTCACGCGCGCCGTCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGC 2411710 || ||||| || ||||| | | || ||||||||| ||||| | | ||||| ||| Sbjct 711827 CGTCGTGCTCGGTGGTCATG-GTGC--TCAGGCGCAGCAGGTCCATCATGTAGTTTTCGC 711771 Query 2411711 CATGCTGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCAGCGGGACGCCAATGTGCT 2411770 | |||||| ||||| ||| |||| || ||||| || || | || ||||| | | || Sbjct 711770 TCTTCTGGTACTCGCTTCCGAGCACGAACTCGAGGCGGTCGACCGACACGCCGACGGCCT 711711 Query 2411771 GGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGTGCTCGACGAGGTCCCACG 2411830 |||| | ||||| || ||| ||| | | |||| | ||| || || | Sbjct 711710 TGAGCGACTCGGTGATGACATACTTGTAGTACTTGGCGCGGTAGTTGACCAGCTCAATGG 711651 Query 2411831 GCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATC 2411890 ||| |||| ||||| ||| |||||| | |||||| | |||||| | || | || | Sbjct 711650 GCGCCTTGAGGTTGTCCAGGAAGGCGTGGATGTCGGCCAGCAGGATCTTGACATGGCAGC 711591 Query 2411891 CGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCC-CAGATGGGGCTTG 2411949 | ||||| || || | || | || | ||||||||||||||||| ||| || ||| || Sbjct 711590 CCGCCTGCAGGAACTGCGCGATCTTGAGCATGGGCACAAAGTAGCCGCAG-TGCGGCCTG 711532 Query 2411950 CCCGTCGGCGCGGTGCCCCAATAAATGCAGAGAGGGCGCTCGGCC 2411994 ||||| | ||| |||||||| || |||| || || |||||| || Sbjct 711531 CCCGTGGTCGCCGTGCCCCAGTAGATGCGCAGCGGCCGCTCGCCC 711487 >seq111 Length=3622730 Score = 187 bits (206), Expect = 4e-41 Identities = 192/251 (76%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 ||||||| ||||| || || || || ||| |||||| |||||||||||||| || Sbjct 146426 TGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGA 146485 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||| || |||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 146486 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGA 146545 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 ||| | | ||||||||||| |||||||| || ||||||||||||||||| | ||| |||| Sbjct 146546 GCGCCACCAGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCA 146605 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| || || |||||||||| || | | ||||| |||||||| ||||| |||| Sbjct 146606 TGCCGAGAAGAGCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCT 146665 Query 794131 CGATGATGATC 794141 ||||||||||| Sbjct 146666 CGATGATGATC 146676 Score = 114 bits (126), Expect = 2e-19 Identities = 159/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | ||||||||| | |||||||| ||||||| || | |||||||| | Sbjct 147120 AAGCAGCGGGCCTCGGGGATCTGGACCTCGGAGCTGAAGCGCTCGACGAGGTTCTCGTTC 147179 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 |||||||| || |||||||| |||||||| ||||| ||| ||| ||||||||| Sbjct 147180 ACGATGCCATCCGACGCGGCGAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCG 147239 Query 796261 TCGCTGA---GCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317 ||| ||| || | ||||| | ||| | |||||| | |||||| || ||| Sbjct 147240 TCGTTGAGGCGCTTGTTCCAGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCAGCAGTC 147299 Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT 796359 || || || ||||| ||||| |||||||||| ||| ||| || Sbjct 147300 CAGAAAGAAGCCTCCGCCTTCTTGTACATCTGCCAGATCTGT 147341 Score = 105 bits (116), Expect = 1e-16 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || |||||||| |||| ||| ||||||| |||||||| | | ||||||| Sbjct 919385 CTGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCT 919326 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||||||| || | |||| || | ||| || | ||| | | || Sbjct 919325 AGTGCCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGACC 919266 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| || || | ||||||||| | ||||| | || || || |||||||| || || Sbjct 919265 GATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 919206 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACG 2073757 ||| || |||||||||| | || ||||| |||| Sbjct 919205 GATGCTATCCTCCTTCATGTCGATGAGGAAGCAAGACG 919168 Score = 91.5 bits (100), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 794595 GTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAA 794654 ||| |||||||||||||||||||||||||| ||||||||||| || || ||||||||| Sbjct 147053 GTACGTGTCGATGAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAA 147112 Query 794655 GCCATAAAAGCAG 794667 ||| || |||||| Sbjct 147113 GCCGTAGAAGCAG 147125 Score = 87.8 bits (96), Expect = 3e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| || |||| || || ||||| |||||| |||||||||||||||||||| | Sbjct 919521 TCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAA 919462 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 | || || | || || |||||||||||| ||||| |||||| ||| ||||| ||| Sbjct 919461 GATCAAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCG 919402 Query 2071997 TGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 919401 GACGCTTGTTGCCACC 919386 >seq74 Length=3761735 Score = 136 bits (150), Expect = 6e-26 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||||||||||||||| | || |||||| | || ||||||||||| |||||| Sbjct 2497268 GCCGCCAACTACCTCGACATCAAGGCTCTTCTCGATGTCGGCTGCAAGACCGTCGCCAAC 2497327 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| || || || |||||||||||||| |||||| || ||| Sbjct 2497328 ATGATCAAGGGCAAGTCCCCTGACGAGATCCGCAAGACCTTCAACATCCAGAACG 2497382 >seq96 Length=137467 Score = 120 bits (132), Expect = 5e-21 Identities = 245/368 (67%), Gaps = 4/368 (1%) Strand=Plus/Minus Query 2071615 CCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCA 2071674 || |||| || |||| ||| | | |||| ||||||||||| ||||| | ||| | Sbjct 7756 CCGAGGTGCTTCTGGGCGCTCTTGACGTTGCAGGCGTCCTTGTACAGCACGCTTGGCCCG 7697 Query 2071675 CCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTC 2071734 |||||||| |||||| | ||| | ||||||||| | | | ||| | || | | Sbjct 7696 CCCGTCTCCATCTGCATCTCGACCACGGCCGACCACAGTGCCCTCGCCTTGAGCGTGCGC 7637 Query 2071735 CTCGCGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCAC 2071794 | |||||||| |||| ||||| || || | ||| ||| Sbjct 7636 CGGCCGCGGCCCGTCCCCTCGTACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAG 7577 Query 2071795 TCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACG 2071854 ||| || ||||| ||||| |||||| | |||| |||||||||| | | || Sbjct 7576 TCGACGAGCCCGGGACACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACC 7517 Query 2071855 CGGCGCATAAACAGGTC--GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCT 2071912 |||||||| |||||||| |||| |||||| |||| || ||||| ||||| || Sbjct 7516 CGGCGCATGAACAGGTCCGGCAC--CCACAGCGCGTAGGCCAGGTCGCGTGCCCGCAGCT 7459 Query 2071913 CCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCT 2071972 | ||||||||| | | ||||| ||| |||| | || |||||||||||||||| Sbjct 7458 CATCCTTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACATCGGCGTGCCACGGCT 7399 Query 2071973 CCAGGTAG 2071980 |||||||| Sbjct 7398 CCAGGTAG 7391 >seq84 Length=2904622 Score = 120 bits (132), Expect = 5e-21 Identities = 153/201 (76%), Gaps = 11/201 (5%) Strand=Plus/Plus Query 653619 TCAAGATCGTCACCCGCGCCATGCGC--CAGCCCGAGGTGGGCGACAAACTGTCGTCGCG 653676 |||||||| || |||| || ||| | ||||||| |||||||||| | |||||||| Sbjct 2783366 TCAAGATC--CAGACGCGGCAAACGCGGCGGCCCGAGCTGGGCGACAAGTTCTCGTCGCG 2783423 Query 653677 CCACGGGCAAAAGGGCACCGTGGGCAGCGTGCGCTCGACC-GA-GGAAATGCCGTGGTCG 653734 ||||||||||||||| ||| |||| | | ||| ||| | || ||| ||||||| || Sbjct 2783424 GCACGGGCAAAAGGGCGTCGTCGGCATCAT-CGC-CGAGCAGACGGACATGCCGT--TCA 2783479 Query 653735 CCGCGCGGGGGCGCCACGCCCGACATCGTCATCAACCCGCACGCCATCCCGTCGCGCATG 653794 || | || | | || |||||| |||| |||||||||| | |||||||||||||| Sbjct 2783480 ACGACCAAGGCATCTGC-CCGGACATCATCATGAACCCGCACGGCTTCCCGTCGCGCATG 2783538 Query 653795 ACCATGGGCAAGATGATGGAG 653815 || ||||||||||| ||||| Sbjct 2783539 ACGGTGGGCAAGATGCTGGAG 2783559 >seq106 Length=1498104 Score = 102 bits (112), Expect = 1e-15 Identities = 212/311 (68%), Gaps = 5/311 (2%) Strand=Plus/Plus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || || ||||| || || | ||| | || || | || |||| Sbjct 1289915 TGCCGTCGGTGCCGTTCTTGAAGCCGACAGGGAAGGACAGGCCGGAGGCAAGCTCACGGT 1289974 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCC-CACGCCACGAGGTCTGCCAAA 2175194 ||| ||||||||||| || |||||||||||||||||| ||| || || || |||| Sbjct 1289975 GCAGTTGGCTCTCGGTCGTCCGCGCGCCCACGGCGCCCACAC-TCAGCAGATCGGCCAGG 1290033 Query 2175195 TAGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACC 2175254 | ||| | | || | |||| || | ||| ||| ||| || | Sbjct 1290034 AACTGCGGAGAGATTGTATCCAGCATCTCGCTCGCAATAGGCATGCC-ACG--CTCGGTC 1290090 Query 2175255 AGGTCGCGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTCG 2175314 |||||| | || |||||||| | |||||| | || | || |||| Sbjct 1290091 AGGTCGACAAAGAGCTGACGCGATATTCTGAGGCCCTTATTAATCTGGAAAGAGTTGTCG 1290150 Query 2175315 AGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAG 2175374 | |||||||||| || ||||||||||| || ||||| ||||| ||||| |||| ||| Sbjct 1290151 ATGTCGGGGTCGTTGATTAGGCCCTTCCAACCCACGGTGGTGCGGGGCTTCTCGAGGTAG 1290210 Query 2175375 GCGCGCATGAC 2175385 | ||||||||| Sbjct 1290211 GAGCGCATGAC 1290221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916234166925485