Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq80 127 1e-24 seq114 118 7e-22 seq115 109 4e-19 >seq80 Length=2705162 Score = 127 bits (140), Expect = 1e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| || | || ||||||||||||||| |||||||| ||| | || | || Sbjct 1573218 CAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTC 1573159 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || ||||||||||| || |||||||| | || | ||||||||||| Sbjct 1573158 CTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 1573099 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || ||| | |||| || | |||||| || | ||| ||||| Sbjct 1573098 TTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGACTTCCAGGGTGATGGT 1573039 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||||||||| || ||||| ||||| Sbjct 1573038 CTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 1573006 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| |||||| || ||||| ||||| || || ||||| | || Sbjct 1573445 AGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGCCCGTCC 1573386 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || |||||||| || || ||||| || |||| | ||||||||||| Sbjct 1573385 TCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCC 1573326 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || | || || || | || || ||| Sbjct 1573325 TGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACCTCGAGCGTGATAGTC 1573266 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || |||||||| || |||||||||||| Sbjct 1573265 TTTCCAGTCAGGGTCTTGACGAAGATCTGCATG 1573233 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| |||| ||||||||||||||| ||||| || ||| |||| |||| Sbjct 1572706 AGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCT 1572647 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||||| || ||||| || | || | || ||||| || Sbjct 1572646 TCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTATCC 1572587 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||||| |||| ||| |||||| Sbjct 1572586 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTC 1572527 Query 34946 TTTCCCGTGA 34955 || || |||| Sbjct 1572526 TTGCCGGTGA 1572517 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/192 (71%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||| ||||| ||||| || ||| | || |||| Sbjct 1572989 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCC 1572930 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| || |||||||| | || | ||||||||||| Sbjct 1572929 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 1572870 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || || |||||| |||| ||| || Sbjct 1572869 TGGATCTTCGACTTGAC--AT--TGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGAT 1572814 Query 34942 GGTCTTTCCCGT 34953 |||||| || || Sbjct 1572813 GGTCTTGCCAGT 1572802 >seq114 Length=4268993 Score = 118 bits (130), Expect = 7e-22 Identities = 139/186 (75%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| |||| |||| || || ||||| |||||||||| Sbjct 2016663 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 2016604 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| || |||||||| | || | ||||||||||| | || || ||||| || Sbjct 2016603 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGAC--AT- 2016547 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || || |||||| || | ||| |||||||| |||||||||||||| Sbjct 2016546 -TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 2016488 Query 34964 ACAAAG 34969 || ||| Sbjct 2016487 ACGAAG 2016482 >seq115 Length=1808013 Score = 109 bits (120), Expect = 4e-19 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||||| |||| ||||||||| ||||| |||||||| ||| |||| |||| Sbjct 898968 CAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATC 899027 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || ||||||||||| || |||||||| | || | ||||||||||| Sbjct 899028 CTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 899087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692343521185