Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq111 134 1e-26 seq96 111 1e-19 seq80 84.2 2e-11 >seq111 Length=3622730 Score = 134 bits (148), Expect = 1e-26 Identities = 719/1135 (63%), Gaps = 23/1135 (2%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951 ||||| || ||||||||||| ||||||||||| | |||| || | || ||| | || Sbjct 920437 TTGACGACCTGAAACTCGCCAGCCAGCACACGGC-GAGAGTAGATGTTCGACGTGTACGG 920379 Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011 ||| ||| |||| || ||| | || || || | ||||| |||||| || || Sbjct 920378 CTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGAC 920319 Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071 | || || || || | ||||| | | || | |||||| | | ||||||||| Sbjct 920318 GAGCAGAGAGTTGCGGATACCGTGCTGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCA 920259 Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 | ||| | || | | |||||||||||||||||| | | || || ||| ||| Sbjct 920258 AAGGTCG--GTCGGTGCCTTGTTCCACATGTCGTACTGCAAGATGCCCTGAGAGGCAGGA 920201 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 ||||| ||| || |||| || | | ||| || | ||| || || Sbjct 920200 CTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAATCGAGGCAGTGATG 920141 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249 | | ||| ||| ||||| ||| || || |||| || | || || | ||| Sbjct 920140 GATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGAATCG 920081 Query 147250 TAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309 ||||||| || ||| || ||||||||||| | ||| | || ||| || |||| || Sbjct 920080 AAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATGGGG 920021 Query 147310 CGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT-ATGGGATAGTGGTTGCGATCAATAAT 147368 || || |||||| | || |||| | || ||||||||| || || || Sbjct 920020 CGGTGACGCATGTTGCTCTTTCTGGC-CTCGGGCACCGGGTAGTGGTTGATGTCGATGAT 919962 Query 147369 CTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGT 147428 |||||| | ||| ||| | || | || | | || |||| ||| || || Sbjct 919961 CTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTAGAC 919902 Query 147429 CCCGTCTTCGACACGTACGCATTGGTTC--ACGGCGATAGACGCCAGATTGCAGACGGCC 147486 |||| || || ||| | ||| | || | || |||| |||||||| || Sbjct 919901 ACCGTTCTCAACGTCGACGAA--GGTCGGGAGAGCCAGCGAGGCCAAGTTGCAGACAGCG 919844 Query 147487 GTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACT 147546 ||| |||| | | |||||| ||||| ||| ||| |||||| || || Sbjct 919843 ACCTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGAGCTGCGGATCGTA 919784 Query 147547 CCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 147606 || | || | || ||||| || || ||||| || ||| | |||||| | || Sbjct 919783 CCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGTTA 919724 Query 147607 CCGGTCTCGACTTGCGTTTCAACGATAA---ACCTATGCAGGTCCTGCGCTCGCACCCGC 147663 ||||||||||| || | || | || ||| | || | ||| || || || | Sbjct 919723 CCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAAAGC---TTCTGAGCGCGGACGGTC 919667 Query 147664 TGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAG 147723 | || ||| ||||| || |||||| ||||||| | ||| |||||||| || || Sbjct 919666 TCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCATAA 919607 Query 147724 CAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTA 147783 ||| || || || || |||| | || ||||| || | ||| || ||| | | Sbjct 919606 ACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCG 919547 Query 147784 ACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAA 147843 || ||| ||| || ||||| || | ||| || ||||| | || ||||| || | Sbjct 919546 ACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACT 919487 Query 147844 TCCTCGGCGCCCATGTTGCGTTTCAA-ATTAAGCACGCTATAGATGTCGGCGTGCCAGGG 147902 ||||| ||| ||| | | || || ||| | || ||| |||||||||||| || Sbjct 919486 TCCTCCTTGCCGTGGTT-CTTGCGAAGATCAAGGAAACTGAAGACGTCGGCGTGCCATGG 919428 Query 147903 TTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGCAC 147959 || | ||||| ||| | ||||| |||||| || |||||||| || | |||| | Sbjct 919427 CTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTAGCGCGC 919368 Query 147960 CATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014 ||||||| | ||||| | |||||| || |||| | ||||||||||||| Sbjct 919367 AGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTAGTGCCGTTGGTG 919313 Score = 114 bits (126), Expect = 1e-20 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 47058 ATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAG 47117 ||||| |||||||| | || | |||||||||||||| | || |||||||| || || Sbjct 146654 ATCGAGAAGGAGTTCCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGC-CAC 146596 Query 47118 TCT-ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACC 47176 || |||||| | || || ||||| || ||||| || ||| ||||| |||||| |||| Sbjct 146595 GCTCATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTGGTGGCGCTCGG-CAACA 146537 Query 47177 -GAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCA 47235 ||| || | || || || || || || || ||| | |||||||||||| |||| Sbjct 146536 AGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCA 146477 Query 47236 AAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 | ||||| || |||||||| || || || || || Sbjct 146476 AGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 146443 >seq96 Length=137467 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 147685 TCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACAC 147744 |||||| ||||||| | | || |||||| | ||||||| ||| | || ||||||||| Sbjct 7618 TCGTACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAGTCGACGAGCCCGGGACAC 7559 Query 147745 TGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCC 147804 | ||| |||||||||| ||| | ||||| || || || ||||| ||||| ||| Sbjct 7558 TCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACCCGGCGCATGAACAGGTCC 7499 Query 147805 GGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCA----ATCCTCGGCGCCCATGTT 147860 ||||||||||||||||| || ||||| || ||| ||||| | |||| | | Sbjct 7498 GGCACCCACAGCGCGTAGGCCAGGTCGCGTGC-CCGCAGCTCATCCTTGCCGCC---GCT 7443 Query 147861 GCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACG 147915 ||| || || || | | | ||| ||||||||||| || || | ||||||| Sbjct 7442 GCGGCCCAGGTTGAGGAAGTCAAAGACATCGGCGTGCCACGGCTCCAGGTAGACG 7388 >seq80 Length=2705162 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||||||| || ||| || |||||| ||||| || |||| Sbjct 1572688 GACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCG 1572629 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||| | ||||| ||||| ||||| |||||||| ||||| Sbjct 1572628 AAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTATC 1572588 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| || | | | ||||| ||||| ||||||||||| | || Sbjct 1573455 ACGCAGACGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAGAGCGT 1573396 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| || || ||||| ||||| | |||| |||||||| ||||| || || || || Sbjct 1573395 GCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATACC 1573336 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || ||| || |||| | || | || |||| | || || |||| Sbjct 1573335 CTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACCTCGAG 1573276 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 ||| | || || |||||||| || || | ||| ||||||||| Sbjct 1573275 CGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATG 1573233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610514871400