Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq80 122 7e-23 >seq80 Length=2705162 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || | || || || ||||| || |||||||| Sbjct 1573460 CCACCACGCAGACGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAG 1573401 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | ||||| |||| || ||||| ||||| ||| | ||||||||||| ||||||||||| Sbjct 1573400 AGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGG 1573341 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || |||||| | |||| | | || | ||||| | | |||||| Sbjct 1573340 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACC 1573281 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||| || || ||||| || || || ||||| ||||| Sbjct 1573280 TCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 1573234 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||||| |||| ||||| ||| || || || || || ||||| |||||||| Sbjct 1573234 TGCCACCGCGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCG 1573175 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | || |||| || ||||| ||||| ||| | || |||||||| || ||||| | Sbjct 1573174 AGAGGGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGG 1573115 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || ||||||| |||| | | || | ||||| | | || | Sbjct 1573114 GGATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGA 1573055 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| || || || | ||||| || || || || || |||||||||||| Sbjct 1573054 CTTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATA 1573005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933804427880