Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq111 89.7 6e-13 seq76 82.4 1e-10 >seq111 Length=3622730 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | |||||||| ||||| || || || || |||||| ||||| Sbjct 146730 GGCAAAGTCGGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACC 146789 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||||||||| |||||||| | ||| | || | | ||| || ||| ||||||||| Sbjct 146790 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGAT 146849 Query 122778 ACCCTCCAC 122786 |||||| || Sbjct 146850 ACCCTCGAC 146858 >seq76 Length=4877926 Score = 82.4 bits (90), Expect = 1e-10 Identities = 218/327 (67%), Gaps = 21/327 (6%) Strand=Plus/Minus Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599 || |||||||||||||| || | || || | || ||||||||| || || | Sbjct 576433 AACCCATCCATCTCGGTCAGAATCTGGTTCAGCGTGCTTTCTCTCTCGTCGTTGCC---- 576378 Query 11600 ATACCACCA--GCACTGCGTTGCT-------TGCCCACCGCATCAATCTCATCAATGAAG 11650 ||||||| || ||| | ||| | || | || || || ||||| ||||| Sbjct 576377 --ACCACCAAAGCTTTGCTTGGCTCTTGACTTTCCGATGGCGTCGATTTCATCGATGAAA 576320 Query 11651 ACAATACATGGT-TGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACC 11709 | || || || || | ||| || || | | || |||||||| || || | ||| Sbjct 576319 ATGATGCAAGGCGTGCTCTTC-CGCGCAGTGGCGAACAGATCGCGTACTCTCGAAGGACC 576261 Query 11710 CACACCAACAAACATCTCCACAAAGTTTG--CGGCAGAGCACTGGATGAATGGGACATTT 11767 ||||| |||||||||||||| || | | | || || |||| || |||||| || Sbjct 576260 AACACCGACAAACATCTCCACGAACTCGGAACCGCTGA-CACT-GAAGAATGGCACGCCA 576203 Query 11768 GATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGA 11827 |||||||| || |||| || ||||| ||||| || ||||| || ||| | ||| Sbjct 576202 GATTCACCGGCAGTGGCCTTTGCAAGGAGCGTCTTACCGGTACCGGGAGGACCAGAAAGA 576143 Query 11828 AGGGCGCCTCGGGGGATCTTGGCACCA 11854 | ||||| || ||||| || |||||| Sbjct 576142 ATAGCGCCACGCGGGATTTTCGCACCA 576116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031097204000