Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq111 187 3e-42 seq96 89.7 6e-13 >seq111 Length=3622730 Score = 187 bits (206), Expect = 3e-42 Identities = 436/649 (67%), Gaps = 8/649 (1%) Strand=Plus/Plus Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353 |||||||||||||| || | |||||| || || |||||||| | | |||||| Sbjct 919134 CTGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGACATGAAG 919193 Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413 || || |||||||| |||||||| || |||||| || ||| ||||||||| Sbjct 919194 GAGGATAGCATCGACGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGACC 919253 Query 53414 TCGGGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGG 53471 | || || |||||| || | || || | || ||||||| | || | || | Sbjct 919254 GCTGGAGGCATCGGTCTCAA-TGTTC-ACCGCATCCGTGCCACTGGTAGCTACATTGCTG 919311 Query 53472 GGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCC 53531 | || |||||| | | || | | || ||||| ||||||| ||||||||| || | Sbjct 919312 GCACCAACGGCACTAGCAACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCGC 919371 Query 53532 GGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGT 53591 | ||||| |||||||||| ||||| ||| | |||||||||||||||||||| | Sbjct 919372 GCTACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTCGAGCCAT 919431 Query 53592 GGCACGCCGACATTATGGAGTTT-CTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650 ||||||||||| | | ||||| || || || || ||| || || | || || | Sbjct 919432 GGCACGCCGAC-GTCTTCAGTTTCCTTGATCTTCGCAAGAACCACGGCAAGGAGGAAGTC 919490 Query 53651 CGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGA 53709 || || |||||||| ||| ||||| |||||||| || ||||||||| || || || Sbjct 919491 CGGGCTCGCGACCTGTTCTAC-GCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCGA 919549 Query 53710 GAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTA 53769 | || ||| ||| ||| |||||||| ||||||||||| || || | ||| || Sbjct 919550 GCAGAACGGCACCTGGACCCTCATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTA 919609 Query 53770 CGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAA 53829 || || ||||| | | | || | ||||| |||| ||| | ||| Sbjct 919610 TGGAGACGAGTTCGAGGCTCTTTACGAGCAGTACGAGAAGGAGGGTCGCGGCCGTGAGAC 919669 Query 53830 GGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCC 53889 ||| || | || | ||| | || || ||| || |||||| ||||| || | || Sbjct 919670 CGTCCGCGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGGTCGAGACCGGTAACCC 919729 Query 53890 GTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 | |||| ||||||||| |||| ||||||||||| |||||| Sbjct 919730 CTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAAC 919778 Score = 132 bits (146), Expect = 5e-26 Identities = 305/450 (68%), Gaps = 17/450 (4%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| |||||||| || || ||||| ||||| ||||| ||||||| | ||| | Sbjct 920304 CGCAACTCTCTGCTCGTCGCACCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTC 920363 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| ||||||||||||||| | ||||||||| ||||| || || || ||| Sbjct 920364 AACGAGTGTTTCGAGCCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCTGGCGAG 920423 Query 55604 TTTGTCATGATCAACAAGCAC---CTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAAC 55660 || ||| | || ||| | | ||| |||||||| || | || | |||| Sbjct 920424 TT--TCA-GGTCGTCAACCCCTGGCTCCTCAAGGACTTGGTCGACCTCGGCCTGTGGTCT 920480 Query 55661 CCGCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTC---CAGAATCTGGAG 55714 ||||| |||| || || || | ||| || || || |||| | | Sbjct 920481 GATCAGATGAAGAACCGCATCATCGCTTCCAAC---GGTTCTATCCAGCAGATCCCCAAC 920537 Query 55715 ATTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCT 55773 ||||| | || | |||||| | | ||| |||||| |||||| || | ||| | | Sbjct 920538 ATTCC-CGACGACATCAAGGCGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCGCACCAT 920596 Query 55774 GATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTT 55833 | | ||| ||| ||||| ||||| | ||| ||||||||||| || || |||||| Sbjct 920597 CGTCCAGATGGCTGCCGATCGGGGTGCCTTCATTGACCAGTCCCAATCGCTCAACATCCA 920656 Query 55834 CATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGG 55893 |||| | | ||| | ||| |||| | | |||||||||||| || |||||| || Sbjct 920657 CATGAAAGACCCTACGATGGGCAAGATCACGTCGATGCACTTTGCTGGCTGGAAGCTCGG 920716 Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGAC 55923 |||||||| || |||||||| || || || Sbjct 920717 TCTCAAGACTGGCATGTACTACCTCCGTAC 920746 >seq96 Length=137467 Score = 89.7 bits (98), Expect = 6e-13 Identities = 214/319 (67%), Gaps = 21/319 (7%) Strand=Plus/Plus Query 53443 CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCC 53502 ||| ||||| ||||| | ||| ||| || |||| |||| | || |||| || Sbjct 7271 CGTGCGTGCCAACGGGTCGTGCATCGCGGGCACCGACGGGACCGCCAAGGGCATCGGCCC 7330 Query 53503 TATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAA 53562 ||||| |||||||||||| || | || ||| || ||| |||| | Sbjct 7331 CATGCTGCGCGTCTTCAACGACGCCGCGCGGCTCG--------------GGG--GCGCCA 7374 Query 53563 GGGGTCGT-TCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGC 53621 | || | ||| | ||||||| ||||||||||||||||| | | || || ||| | | Sbjct 7375 GCGGCAGCCTCGTCGTCTACCTGGAGCCGTGGCACGCCGATGTCTTTGACTTCCTCAACC 7434 Query 53622 TGCGTCTGAATCAG-GGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTG 53679 || | | | | | | || | || ||| |||| || |||||| ||| || ||||| Sbjct 7435 TGGGCC-GCAGCGGCGGCAAGGATGAGCTGCGGGCACGCGACCTGGCCTAC-GCGCTGTG 7492 Query 53680 GATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCC 53739 | | |||||||| ||||||| ||| || |||||| || ||| ||||||||||| Sbjct 7493 GGTGCCGGACCTGTTCATGCGCCGGGTCGACCAGGACGGCGACTGGACGCTGATGTGCCC 7552 Query 53740 GAACGAGTGCCCCGGCCTC 53758 | |||||| ||||| ||| Sbjct 7553 GGCCGAGTGTCCCGGGCTC 7571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215213377000