Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq80 102 5e-17 >seq80 Length=2705162 Score = 102 bits (112), Expect = 5e-17 Identities = 158/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||| ||| | ||| |||||| |||||||| || || || || || || Sbjct 1573223 AGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGG 1573164 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || ||||| || || || | |||||| |||||||| || | |||||| Sbjct 1573163 CCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCC 1573104 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCT--CTCCACTTCCACG 34665 |||||| |||| || | || ||| | || ||||| || | ||| ||||||| | Sbjct 1573103 TTGTCTTGGATC-TTGGACTTCACGTTGTCGATCGTGTC--CGATGACTCGACTTCCAGG 1573047 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || ||||| | || || || || || ||||| Sbjct 1573046 GTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 1573006 Score = 91.5 bits (100), Expect = 9e-14 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || || || ||||||||| ||||| || || || || || ||| Sbjct 1573451 AGACGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGC 1573392 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || ||||| || || || | |||||| || |||||||| | |||||| Sbjct 1573391 CCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCC 1573332 Query 34609 TTGTC 34613 ||||| Sbjct 1573331 TTGTC 1573327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729158886795