Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq80 140 8e-28 seq114 120 7e-22 seq115 86.0 1e-11 >seq80 Length=2705162 Score = 140 bits (154), Expect = 8e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||||||||| || || || |||| ||||| |||| || || | ||||| Sbjct 1572989 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCC 1572930 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | || || ||||| || || || || |||||||| Sbjct 1572929 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 1572870 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| |||| || || || | ||||| ||| Sbjct 1572869 TGGATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTC 1572810 Query 225682 TTGCCCGTCA 225691 ||||| |||| Sbjct 1572809 TTGCCAGTCA 1572800 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || ||||||| ||||| || | | || | ||| || Sbjct 1573445 AGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGCCCGTCC 1573386 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || || || ||||| ||||| |||||||| Sbjct 1573385 TCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCC 1573326 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| |||||| ||||| ||||| || | ||| || || | |||||| ||| Sbjct 1573325 TGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACCTCGAGCGTGATAGTC 1573266 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||| || || | ||| | ||||| Sbjct 1573265 TTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 1573234 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || ||||| || || || | ||||| |||| || || | |||||| Sbjct 1572706 AGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCT 1572647 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | || || || || || ||||| |||||||| || Sbjct 1572646 TCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTATCC 1572587 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | || || || | ||||| ||| Sbjct 1572586 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTC 1572527 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 1572526 TTGCCGGT 1572519 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || || || | ||| || || || || | ||||| || | | || Sbjct 1573226 CGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTA 1573167 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| || |||||||| || || || ||||| || || || || Sbjct 1573166 CGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCC 1573107 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| |||||| ||||| ||||| || | || || || | Sbjct 1573106 TCCTTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGACTTCCAGG 1573047 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | |||||| Sbjct 1573046 GTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 1573006 >seq114 Length=4268993 Score = 120 bits (132), Expect = 7e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| || || | ||||| || |||||||| || |||||||| Sbjct 2016661 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2016602 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || |||||||| |||||||| ||| ||| ||| Sbjct 2016601 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 2016542 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| |||| || || || | ||||| ||||||||||| Sbjct 2016541 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 2016498 >seq115 Length=1808013 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || ||||| || || |||| ||||| || | | || Sbjct 898959 ACGCAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 899018 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| || || || ||||| || || || || Sbjct 899019 GCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCC 899078 Query 225612 TTCCTTGTCT 225621 ||||||||| Sbjct 899079 CTCCTTGTCT 899088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529442879810