Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq76 100 2e-16 >seq76 Length=4877926 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165 || ||| ||| ||||| ||||| ||||| ||| || | || ||||| || |||||| Sbjct 1306958 GGGAAGTCTCTTGGCTCTCTCTCCAGCTGCACCTTTAGTGCATCGACGTGGTCGAGGTAG 1307017 Query 27166 ACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 27224 || || || || |||| |||||| | ||| | | || || || | |||||| || Sbjct 1307018 ACATGGGCATCGCCCATGGTGTGCGTCAACGTGCCAGGGGTC-AGATGGCAGACGTGCGC 1307076 Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284 || ||||| ||||||||||| ||| || ||||| || || || ||||| |||||||| Sbjct 1307077 CAGCATGTGCGTGAGGAGAGCGTACGACGCAATGTTGAAAGGCACGCCGAGACCCATGTC 1307136 Query 27285 CCCCGACCTCTGGTAGAGC 27303 | |||| ||| || ||| Sbjct 1307137 GCAAGACCGCTGATAAAGC 1307155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506682112565