Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq80 145 7e-30 seq114 136 4e-27 seq115 120 3e-22 >seq80 Length=2705162 Score = 145 bits (160), Expect = 7e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | |||||||||| || ||||||||||||||| ||||| || Sbjct 1573233 GCCACCGCGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGA 1573174 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || |||| || |||||||| || ||||| ||||| ||||| ||||||| ||| Sbjct 1573173 GAGGGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGG 1573114 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| || |||| ||| | | | ||||| ||||| | Sbjct 1573113 GATGCCCTCCTTGTCTTGGATCTTGGACTTC-ACGTTGTCGATCGTGTCCGATGACTCGA 1573055 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| || || || || || || || ||||| ||||| || ||||| Sbjct 1573054 CTTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 1573006 Score = 122 bits (134), Expect = 8e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | || ||||| || ||| ||||||||||||||| |||||||| Sbjct 1572721 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 1572662 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||||||||| |||| |||||| || |||| ||| Sbjct 1572661 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGAGGA 1572602 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||| ||| ||| || ||| ||| | | | |||||| |||||| || Sbjct 1572601 ATGCCTTCCTTATCCTGGATCTTGCTCTT-GACGTTGTCGATGGTGTCGGACGACTCGAC 1572543 Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838 ||| | || || || || || || Sbjct 1572542 CTCAAGGGTGATGGTCTTGCCGGT 1572519 Score = 109 bits (120), Expect = 5e-19 Identities = 151/208 (73%), Gaps = 9/208 (4%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| |||||||| ||||| || | || || ||||||||||| ||||| Sbjct 1572969 CTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 1572910 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAAC 41788 |||| |||||| ||||||| ||| | || |||||||||| ||| || ||| || Sbjct 1572909 GATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 1572850 Query 41789 GACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT 41848 | || | ||||| ||||| ||||| | || || || || || |||| || | Sbjct 1572849 GTCG--ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCACTGTGATG 1572792 Query 41849 ACGAAAATCTGCATGTTATCGATGGATC 41876 ||| || ||||||| ||||||||| Sbjct 1572791 ACG----TCAGCATGTT-GCGATGGATC 1572769 >seq114 Length=4268993 Score = 136 bits (150), Expect = 4e-27 Identities = 141/183 (77%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||||| |||||||| | || |||||||||||||||||||| | Sbjct 2016663 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 2016604 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 |||||||||| ||||||| ||||| || |||||||||| ||| || ||| || | Sbjct 2016603 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 2016544 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | ||||| ||||| ||||| | || || || || ||||| || ||||| || Sbjct 2016543 CG--ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 2016486 Query 41851 GAA 41853 ||| Sbjct 2016485 GAA 2016483 >seq115 Length=1808013 Score = 120 bits (132), Expect = 3e-22 Identities = 110/139 (79%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || || || | ||| || || || ||| ||||||||| ||||| ||||| | Sbjct 898952 CGCCACCACGCAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCG 899011 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 | |||||||| | || |||||||||||||| ||||| ||||| ||||| ||||||| || Sbjct 899012 AAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGG 899071 Query 41754 GAACGCTCTCCTTGTCCAT 41772 | | || ||||||||| || Sbjct 899072 GGATGCCCTCCTTGTCTAT 899090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303335438000