Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07- 28] 372 sequences; 30,276,903 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq328 170 2e-37 >seq328 Length=1424114 Score = 170 bits (188), Expect = 2e-37 Identities = 478/724 (66%), Gaps = 16/724 (2%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| |||| ||| || || ||||| ||||| || ||||| | || || || |||||| Sbjct 198343 TGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCC 198402 Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || || || | | || | | | || ||| | | || Sbjct 198403 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTG--TTGCCGAGTGCTAACAGTA 198460 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | ||| || || ||||| || ||||| |||| | | |||||| || | ||| | Sbjct 198461 GGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAG-C 198519 Query 16854 GTACC-GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 | | |||||||| || ||||| || ||||| || || || || | || || Sbjct 198520 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG 198579 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 || || | ||| | ||| | | || ||||| |||| || || ||||| Sbjct 198580 CTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAAG 198639 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032 || || | ||||| || | | ||| || ||||| || ||||| | ||||| ||| Sbjct 198640 TCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATG 198699 Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092 || |||||||| | ||| || || || || || || ||||| ||||| |||||||| Sbjct 198700 AGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTCA 198759 Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152 |||| ||||| || || | || |||| | |||| || |||| | ||||||| | Sbjct 198760 ACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCGC 198819 Query 17153 TGCACCCACTCGGCTTTT-TGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA---A 17208 | |||| || || || ||| ||||| || | || ||||| || || | | Sbjct 198820 AACGCCCAGTCAGCCTTCCTGCGG-ATGCATGGGATGTTGTCGATGGCATTGAACAGGTA 198878 Query 17209 T-TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267 | ||| || || | | ||| | || || ||||||||||| ||| || | |||| Sbjct 198879 TGTTCGCTGCTT----TGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGG 198934 Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327 |||| ||||||||||| ||||| || ||||| |||||||| || |||| || || | Sbjct 198935 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCA 198994 Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387 | || | ||| || || | || || ||||| || ||||| ||| |||||||| | Sbjct 198995 CCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGA 199054 Query 17388 ACGC 17391 | || Sbjct 199055 ATGC 199058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543193412960