Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07- 28] 372 sequences; 30,276,903 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq110 140 8e-28 seq43 129 1e-24 seq328 87.8 4e-12 >seq110 Length=2131064 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | || | || |||||| ||||| || ||||||| Sbjct 668546 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 668487 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || ||||| || ||||| ||||| || | |||| Sbjct 668486 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 668427 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || || || || || | ||||| || || || Sbjct 668426 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 668367 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 668366 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 668320 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || | || || || ||||| || | || || || |||||| Sbjct 668738 TCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 668679 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || |||||| || || || || ||||| || | || ||||| Sbjct 668678 ATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTG 668619 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||||| |||||||| ||||| ||||| ||||| || ||||||||| Sbjct 668618 TCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACG 668559 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 668558 AAAATTTGCAT 668548 Score = 109 bits (120), Expect = 1e-18 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | ||||| || || || || || ||||||| Sbjct 668318 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 668259 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || |||||||| |||| || || || | ||| Sbjct 668258 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 668199 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| ||||||||||| || ||| ||||| || || || | ||| ||| || || Sbjct 668198 ATGCCTTCCTTATCCTGGATCTT-GCTCTTCACATTGTCGATGGTGTCGGACGACTCAAC 668140 Query 288426 TTCGAGCGTGATCGTCTTCCCGGT 288449 ||||| || || ||||| ||||| Sbjct 668139 CTCGAGGGTAATGGTCTTGCCGGT 668116 >seq43 Length=625496 Score = 129 bits (142), Expect = 1e-24 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| ||||| || || || || || ||||| ||||||||| Sbjct 14041 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 14100 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTC 288404 | |||||| || ||||||||| || || |||||||| || ||| || || || || Sbjct 14101 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTT-GCTCTTGACATTGTC 14159 Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||||||||| ||||| || || || ||||| ||||| Sbjct 14160 GATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 14219 >seq328 Length=1424114 Score = 87.8 bits (96), Expect = 4e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 269155 GGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG 269214 || ||||| || | |||||| ||||| || |||||||| || ||||| | | Sbjct 198512 GGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCGCCTACTGTTA 198453 Query 269215 GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATT 269274 |||||||| | |||| | ||||| | | || ||||||| ||| ||||| ||| Sbjct 198452 GCACTCGGCAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATT 198393 Query 269275 TCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGT 269334 ||||| | || ||||| ||||||||||| |||||||| |||| || || ||||| Sbjct 198392 TCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAGAAGGCTGGT 198333 Query 269335 GTAATG 269340 || ||| Sbjct 198332 GTCATG 198327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179648777472216