Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07- 28] 372 sequences; 30,276,903 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq328 123 2e-23 seq110 96.9 3e-15 >seq328 Length=1424114 Score = 123 bits (136), Expect = 2e-23 Identities = 174/239 (73%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 52601 GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660 |||||| ||| ||||| || | ||||| ||||||| || || | ||| || || Sbjct 198582 GAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATG 198523 Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCG 52720 | |||| ||||| |||||||| ||||| | ||||| || || || || ||||| Sbjct 198522 CAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCG 198463 Query 52721 TCTGTTGGT-GCAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTT 52778 || || | ||| ||||| || | | |||| || |||||| ||| || || || || Sbjct 198462 CCTACTGTTAGCA-CTCGG-CAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTC 198405 Query 52779 ATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| | ||||||||||| | |||||||||||||| ||||||||||| || |||||||| Sbjct 198404 ATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 198346 >seq110 Length=2131064 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || |||||||||||| || |||||| |||||||| || || || | | Sbjct 668513 GATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCA 668454 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || || ||||| ||||| || || ||||| || ||||| ||| || || | | Sbjct 668453 AAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACA 668394 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||||| | ||||| ||||||| || | || || || || ||||| || Sbjct 668393 TTG-TCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTT 668335 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 668334 GACGAAGATCTGCAT 668320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260092379840