Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07-
28] 372 sequences; 30,276,903 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq328 123 2e-23
seq110 96.9 3e-15
>seq328
Length=1424114
Score = 123 bits (136), Expect = 2e-23
Identities = 174/239 (73%), Gaps = 4/239 (2%)
Strand=Plus/Minus
Query 52601 GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660
|||||| ||| ||||| || | ||||| ||||||| || || | ||| || ||
Sbjct 198582 GAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATG 198523
Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCG 52720
| |||| ||||| |||||||| ||||| | ||||| || || || || |||||
Sbjct 198522 CAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCG 198463
Query 52721 TCTGTTGGT-GCAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTT 52778
|| || | ||| ||||| || | | |||| || |||||| ||| || || || ||
Sbjct 198462 CCTACTGTTAGCA-CTCGG-CAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTC 198405
Query 52779 ATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||| | ||||||||||| | |||||||||||||| ||||||||||| || ||||||||
Sbjct 198404 ATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 198346
>seq110
Length=2131064
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| || || || |||||||||||| || |||||| |||||||| || || || | |
Sbjct 668513 GATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCA 668454
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || || ||||| ||||| || || ||||| || ||||| ||| || || | |
Sbjct 668453 AAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACA 668394
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | ||||||| | ||||| ||||||| || | || || || || ||||| ||
Sbjct 668393 TTG-TCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTT 668335
Query 138600 TACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 668334 GACGAAGATCTGCAT 668320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260092379840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |