Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07- 28] 372 sequences; 30,276,903 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq350 129 9e-25 >seq350 Length=908247 Score = 129 bits (142), Expect = 9e-25 Identities = 439/669 (66%), Gaps = 14/669 (2%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||||| |||||| |||||||| ||| || ||| | || | || || ||| || Sbjct 654608 CTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCT 654549 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001 ||||||||| || ||||||||||| ||||| || | ||| |||| |||| | || Sbjct 654548 CTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTC 654489 Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC-CCTTGAGAC 205060 | ||||| ||| | || |||| || || |||| | | |||| | Sbjct 654488 G-AGAATAGCATACCATATTTTCTGAGCACGAACCGTCT-CACGGCCCTTGCCTTCTCTC 654431 Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120 || || ||||||| || || || |||||| || ||| ||| || || ||| Sbjct 654430 TCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCAT 654371 Query 205121 TTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | ||||| |||||||||| ||| | | | || | || || | || |||||| || || Sbjct 654370 TCGTTGGGGCACATCAGAGTCCAAGTGCCGTTC-TGTTCGACACGCTGCATAAAGAGATC 654312 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239 | ||||| || |||| |||| ||| || || | || | | || | |||| ||||||| Sbjct 654311 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTT 654252 Query 205240 TTTCAAGTCCAGCCAAGCCGCA--ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 | ||||| | | ||| | ||| || ||||||||||| | | | ||| | Sbjct 654251 GCGAAGGTCCATGAA--CTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAA 654194 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357 || ||||| | |||||| ||||||||||| || |||| | ||| | ||||| Sbjct 654193 GCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGT 654134 Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCC 205417 ||||| || || |||||||||| || ||||| |||| | ||| |||||| ||| Sbjct 654133 AGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCC 654074 Query 205418 CTCACGTTG-GAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCA-CT 205475 || | |||| || | | ||||| ||||||| ||||| |||| ||| || | Sbjct 654073 CTGATGTTGTGAACATGAAG-ACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATAT 654015 Query 205476 CTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACG 205535 |||| || || |||||| || | ||| || ||| || | ||||| |||| | Sbjct 654014 CTTG-AGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGG 653956 Query 205536 AAGCCAGCT 205544 | || |||| Sbjct 653955 ATGCTAGCT 653947 Score = 84.2 bits (92), Expect = 3e-11 Identities = 218/330 (66%), Gaps = 2/330 (1%) Strand=Plus/Minus Query 204185 GGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAAT 204244 ||||||| || ||| || || || | || ||| | || | | | | |||| | ||| || Sbjct 655225 GGGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTAT 655166 Query 204245 GGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCC 204304 || ||||| |||||| ||| | ||||| | ||| ||| || ||||| || || Sbjct 655165 GGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 655106 Query 204305 AGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCG 204364 | ||| || |||||||||||||||| | || | ||| ||| || | || |||||| Sbjct 655105 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCC 655046 Query 204365 TGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGG 204424 | | | || || ||||||||||||| |||| | ||| || ||||| Sbjct 655045 CAGAGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGA 654986 Query 204425 CTGCCCTTGTACGTCGGATAAGG-CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCAT 204483 ||| ||| ||| ||||| | || | || || || |||| ||| || || | | Sbjct 654985 GAGCCTGGGTATGTCTCGTAAGGACCGAGCTTC-TCAGCAAGCTCGCATGAAGCCTCAAG 654927 Query 204484 GGCGTGATAGTACATGGTCTCAAAGATCTG 204513 || || || ||||||||||| ||||| Sbjct 654926 AGCAGCATGATAGATGGTCTCAAAAATCTG 654897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795151502528320