Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07-
28] 372 sequences; 30,276,903 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq328 268 1e-66
seq287 129 7e-25
seq187 109 7e-19
>seq328
Length=1424114
Score = 268 bits (296), Expect = 1e-66
Identities = 484/702 (69%), Gaps = 8/702 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || | ||||| || || |||||
Sbjct 750426 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAAATACCC 750367
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| ||||| | | || ||| ||||| || ||||||||||| || || || ||||| ||
Sbjct 750366 TCCTCAATTGTGAGCAGCGATACATCGAAGGTACCACCACCAAGATCGAAGATGAGCACA 750307
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || | ||||| ||||||||||| || || || || || || || ||
Sbjct 750306 TTGCGCTCGCCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCTGCTGCAGTCGGCTCG 750247
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695
|| || ||||| || ||| ||||||||||| | ||| || || || || ||||||||
Sbjct 750246 TTGATGATACGGAGGACGTTGAGGCCAGCAAT-GAGGCCGGCGTCCTTGGTTGCTTGTCG 750188
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||||| ||||| || || || || ||||| ||||| |||| |||| | ||| ||
Sbjct 750187 CTGCGAGTCGTTGAAATATGCTGGAACCGTGACGACGGCGTTGTTGACGGTGCCACCAAG 750128
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815
||||| || ||| | || ||| || || |||| ||| | || ||||| || | |
Sbjct 750127 GTACGACTCTGCGGTCTCACGCATCTTTGTGAGAATCATGGCGGAGATCTCCTCTGGTGT 750068
Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875
||||| ||| || || || || || || || | || || ||| ||
Sbjct 750067 GAACTGCTTCTCCTCGCCCTTGAACTCGACCGAGATGACTGGCTT-GCCG--GCCTTCTC 750011
Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935
||| ||||| | | | | |||||||| |||| |||| | ||| ||||| |
Sbjct 750010 GATGACCTTGAAGGGAAAGTGCTTCATATCTGCTTGCACCTCTGCGTCTTGGAACTTGCG 749951
Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995
||||| | |||||||| || || ||||||||| ||||||||||| ||||||||
Sbjct 749950 GCCGATCAATCGCTTTGCGTCGAAGACTGTGTTTGCTGGGTTCATGGCGACCTGGTTCTT 749891
Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055
|| || || ||||| ||||| || | || || || |||||| | || || || ||
Sbjct 749890 GGCAGCATCACCGATTAGACGCTC---GGTGTCTGTGAAGGCGACGAATGAGGGTGTTGT 749834
Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115
|| || || || ||||| || || || || | ||| || | | ||| || |||||
Sbjct 749833 GCGGTTGCCCTGATCGTTGGCGATGATCTCGATGCGATCATCTCTGAAGATACCCACGCA 749774
Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157
|| ||||| || || || || |||||||||||| | | |||
Sbjct 749773 GGAGTACGTGGTACCCAAGTCGATACCGATTGCTGGTGCCAT 749732
Score = 129 bits (142), Expect = 7e-25
Identities = 258/381 (68%), Gaps = 1/381 (0%)
Strand=Plus/Minus
Query 7014 CCGTTAAG-ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072
||| |||| ||||| || ||||| | || ||||| || || ||||| || ||||| ||
Sbjct 752361 CCGCTAAGGATGGCAGCCTGGACGGCAGCACCGTAGGCAACGGCCTCGTCTGGGTTGATA 752302
Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATT 7132
| | | || | || || ||||| || | || || | ||| | || || || |||||
Sbjct 752301 GATCTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGATCTTGGGGATA 752242
Query 7133 CGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT 7192
|| || || || ||||| | ||||| || | || || || |||||||| | ||
Sbjct 752241 CGAGTGGAACCGCCGACAAGGACGATCTCGTGGACGGAAGACTTGTCGATCTTGGCATCG 752182
Query 7193 CGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCA 7252
|| || || || || || ||||| |||||| | |||| || || || ||
Sbjct 752181 CGGAGAGTGCGCTCCACGGGCTCCATGGTGGAACGGAAAAGGTCCTGGCAAAGCTCTTCG 752122
Query 7253 AAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCA 7312
|| || ||||| || ||||| || ||||| || | ||| ||||| | ||| || || ||
Sbjct 752121 AAGCGAGCACGCGTGATGGAAGTGTAGAAGTCGATGCCCTCGTAGAGCGAGTCGATCTCG 752062
Query 7313 ATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAA 7372
|| | || ||||| | || | || ||||| ||||| || || || || || | |
Sbjct 752061 ATAGAAGTCTGTGCGCTGCTGGAGAGGGTGCGCTTCGCGCGTTCGCATGCTGTCCGCAGA 752002
Query 7373 CGACGAAGGGCACGCGGGTTA 7393
||||||||||| || | ||||
Sbjct 752001 CGACGAAGGGCGCGGGCGTTA 751981
>seq287
Length=238642
Score = 129 bits (142), Expect = 7e-25
Identities = 210/302 (70%), Gaps = 3/302 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| | ||||||||| || || || || ||||| || ||||| |||| |||
Sbjct 52325 TCGAAATCCTGACCACCCAAATGGGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCG 52266
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| | ||||| | | || ||||| || ||||||||||| || || | ||||| |||
Sbjct 52265 CCCTGAATGTGAAGAAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGACG 52206
Query 7577 TTCGTATCGTCGTC---TTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
|| || | ||| ||| ||||||| || |||||||| || || |||||
Sbjct 52205 TTTCGCTCCTTGTCAGACTTGCCGGAGCCGAGACCATATGCGATAGCAGCGGCAGTTGGC 52146
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || || || || ||| ||| || || || || | | || || || || ||||||
Sbjct 52145 TCGTTGATGATGCGCAGAACGTTGAGTCCGGCGATGGCACCAGCGTCCTTGGTGGCTTGT 52086
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
| || |||||| ||||| |||||||| || | ||| || | | ||| ||||| |||
Sbjct 52085 CTCTGGTTATCGTTGAAGTAAGCCGGGACGGTAATGACGGCCTTCTCGACCTTCTTGCCG 52026
Query 7754 AG 7755
||
Sbjct 52025 AG 52024
>seq187
Length=381172
Score = 109 bits (120), Expect = 7e-19
Identities = 240/356 (67%), Gaps = 9/356 (3%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||| | || || || || || || || | || || || | |||
Sbjct 117630 TCGAAGTCCTCACCACCAAGATGGGTGTCACCGGCCGTTGCCTGAACCTCGAACACACCC 117689
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573
|| | | || | || ||||| || ||||||||||| ||||| | |||||
Sbjct 117690 TGGTCGACAGTCAAGATGGAGACATCGAAAGTACCACCACCGAGGTCGTAGACAATGA-- 117747
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| ||| || | ||| | |||| ||||| ||||| |||| ||| || || || |||
Sbjct 117748 TCTGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCGAGAGCGGCGGCGGTAGGT 117803
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || | | ||| || ||| || || || || || | || || || || ||
Sbjct 117804 TCGTTGACGACACGGAGGACGTTGAGACCGGCGATCGTGCCAGCGTCCTTGGTAGCGGCA 117863
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
|| || | ||||| |||||||| ||||| || ||||| |||| ||||| || | |||
Sbjct 117864 CGCTGGGCGTCGTTGAAGTAGGCTGGGACTGTGACGACTGCGTTGGTGACCTTTTCGCCG 117923
Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|| || || || |||| || ||||| ||| || | ||| ||||| | ||||||
Sbjct 117924 AGGTATGACTCGGCGACTTCCTTCATCTTGCCCAGGATCATGGATGAGACCTCTTC 117979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635129846632480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |