Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07- 28] 372 sequences; 30,276,903 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq313 96.9 4e-15 >seq313 Length=158424 Score = 96.9 bits (106), Expect = 4e-15 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 || ||| | ||||||||||| || ||||| ||||| || | ||| || | || Sbjct 54209 ATCATGGTAACATATCCATCGACGTTCGGTGTGTTTGAGCCAGAAGTCAAGAAGGTCTGC 54268 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | |||| || | |||| || || || || | ||||| |||||| | || || ||| Sbjct 54269 GATCTTGTGCACCATTATGGCGGGCAAGTCTACATGGATGGCGCAAATATGAACGCTCAG 54328 Query 159667 GTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAA 159725 | || || | ||| | || || || |||||||| || ||||| ||| | ||||| Sbjct 54329 ATCGGCCTCACTTCTCCAGGA-ACAATTGGCGCAGATGTGTGCCATCTGAACCTGCATAA 54387 Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGC 159782 ||| |||||||||||||| || || || || ||||| || || || || ||||| || Sbjct 54388 GACCTTCTGTATTCCACACGGTGGAGGCGGACCTGGTGTCGGACCCATCGGTGTTGC 54444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048465561920