Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07- 28] 372 sequences; 30,276,903 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq328 176 8e-39 seq350 156 8e-33 >seq328 Length=1424114 Score = 176 bits (194), Expect = 8e-39 Identities = 560/862 (65%), Gaps = 34/862 (4%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||||| ||||| | |||| |||||| || || |||||||||||| Sbjct 199187 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 199128 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGA-GCAGCATT-TTC-TCAAG 25593 | ||||| | ||| |||| || | | ||| ||||| | | ||| ||| || Sbjct 199127 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 199068 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | |||||||| || || || ||||| || || |||||||| || |||| | Sbjct 199067 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 199008 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | || |||||| | |||||| || |||||||| |||||||| || Sbjct 199007 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 198948 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA--CAGACG 25768 || || | ||||| ||| ||| || ||||| || || ||||| | || | Sbjct 198947 GAGAACATCCACTCCGAGACATATTCC---CTTCTCATCGATACATACATCAGCGAGCCA 198891 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 || | || | || ||||| ||||||||| |||| || ||||| ||||||| Sbjct 198890 AAGCAGCGA-ACAT-ACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 198833 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | ||||| || ||||| | ||| | | || || | | || || | | Sbjct 198832 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 198773 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 | ||||| || || ||||| ||||| ||| || || ||||| || ||||||||||| | Sbjct 198772 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 198713 Query 25949 AGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 || | | | || | |||| ||||||| || || |||||||||||| | | || ||| Sbjct 198712 AG-AAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 198654 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 || | |||| ||| || |||||||| || | | || || || |||| || Sbjct 198653 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAAC 198597 Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127 || | || | || ||||||| ||||| || ||||||| ||||||| Sbjct 198596 CAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACA 198537 Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAG 26187 |||| |||||| | |||||| ||||||||||| Sbjct 198536 GACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAA 198477 Query 26188 TATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTACG 26241 | || ||||| | || |||| | | ||||| | ||| |||||| ||| Sbjct 198476 TTCGTCGCCGATCGCCTACTGT------TAGCACTCGGCAACAAGAAGTTCTACA--ACG 198425 Query 26242 C--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTG 26299 | | ||||| |||||||| ||||| ||||| ||| ||| || |||||||||||||| | Sbjct 198424 CCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCG 198365 Query 26300 AAAAGAGGGTCGGCGACTATCA 26321 | ||| | || ||||| || || Sbjct 198364 AGAAGCGTGTTGGCGAGTACCA 198343 >seq350 Length=908247 Score = 156 bits (172), Expect = 8e-33 Identities = 430/649 (66%), Gaps = 25/649 (4%) Strand=Plus/Minus Query 221750 TACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTA 221809 |||| |||||||| || || | || || ||||||||| || || | || ||||| Sbjct 654610 TACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTG 654551 Query 221810 GACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCC 221869 |||||| ||||| ||||||||||| || || || || ||| ||||| ||| ||| Sbjct 654550 CTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCC 654491 Query 221870 ACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGT 221928 | ||||| | ||| | || |||| || | |||||| | || || | | | Sbjct 654490 TCGAGAATAGCATACCATATTT-TCTGAGCACGAACCGTC----TCACGGCCCTTGCCTT 654436 Query 221929 CTTT-TCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTG 221987 || | ||||| | || ||| | |||| |||||||| | || ||| || | Sbjct 654435 CTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAG 654376 Query 221988 GACACCTGGCGGGACACATCAGACTCCA-GTGCTTGTTGTCTTTGACCCTCTGCATGAAG 222046 | || | ||| ||||||||| |||| |||| ||| | || ||| | |||||| ||| Sbjct 654375 GGCATTCGTTGGGGCACATCAGAGTCCAAGTGCC-GTTCTGTTCGACACGCTGCATAAAG 654317 Query 222047 AGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTG 222106 || || || ||||| || || | || | ||| | | || || ||| || | | Sbjct 654316 AGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGG 654257 Query 222107 TTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCC 222166 || || | || |||| |||| | | ||| || ||||||||||| || |||| ||| Sbjct 654256 TTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCA 654197 Query 222167 AGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAG-AGCGTTG---AA 222222 | ||| || || ||||||||||||||||| | || | | | || || |||| | Sbjct 654196 AAAGCACCTGGACGCTTGTTGCCACCCTGGT----CAACGTAACGAGCAGTGTTGTTATA 654141 Query 222223 GATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACC 222282 || || || | ||||| || ||||||||| ||||| ||||| |||||| | || Sbjct 654140 GACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCC 654081 Query 222283 GCCGGCCCTCAGGTT----ACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCA 222338 |||||| | ||| || | ||| || ||||| || |||| || ||||||| Sbjct 654080 TGTGGCCCTGATGTTGTGAACATGAAGA----CCAATACCGCCAGCGTTCTTGGAGATCA 654025 Query 222339 TGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTT 222387 |||| || ||||||| || || ||| || || || ||| ||||| Sbjct 654024 TGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTT 653976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928840480871680