Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07-
28] 372 sequences; 30,276,903 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq328 174 2e-37
seq335 127 3e-23
seq350 95.1 2e-13
>seq328
Length=1424114
Score = 174 bits (192), Expect = 2e-37
Identities = 357/515 (69%), Gaps = 28/515 (5%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || |
Sbjct 199188 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 199130
Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888
| | || | | ||||| ||| || | | ||||||||| || ||||
Sbjct 199129 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 199073
Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948
|| ||||||||||| || || |||||| ||||||||| || ||||||||| | |
Sbjct 199072 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 199014
Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
| ||||| | ||||| || | || |||||||| | || ||||| |||||||||
Sbjct 199013 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 198954
Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || ||||||||||| || || || || || || ||||| || ||| ||| ||
Sbjct 198953 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 198894
Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125
|| || || || | |||| || |||||||||| | || | | | |
Sbjct 198893 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 198837
Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182
||||| ||||||||| || ||||| ||||| | ||||||| || ||| |
Sbjct 198836 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 198782
Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240
| ||| | | ||||||| ||| ||||| ||||| ||||| || | || ||| || |||
Sbjct 198781 GTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 198723
Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|| ||||| ||||| || || |||||| |||| ||
Sbjct 198722 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 198688
Score = 95.1 bits (104), Expect = 2e-13
Identities = 176/253 (70%), Gaps = 4/253 (2%)
Strand=Plus/Minus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| |||||||||| ||||||| | ||||| | | || | || || |
Sbjct 198578 ATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAG 198519
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| | || |||||||| | ||||||| || ||||||||||| |||||||| ||||
Sbjct 198518 CTTCTGGGGATGAACGCTGGC-CTCATGTCACAATACATTGAATTC-GTCGCCGATCGCC 198461
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| || || |||||| | ||||| |||| | ||||||| ||| | |||
Sbjct 198460 TACTGTTAGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 198402
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761
||| || ||||| | |||||||||||||| |||||| || | ||||||||||
Sbjct 198401 GAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAG 198342
Query 1456762 AAGGCCGGCGTCA 1456774
||||| || ||||
Sbjct 198341 AAGGCTGGTGTCA 198329
>seq335
Length=67459
Score = 127 bits (140), Expect = 3e-23
Identities = 318/483 (66%), Gaps = 0/483 (0%)
Strand=Plus/Minus
Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906
||| ||| | || ||||| ||| | |||| | ||| || || || || || | ||
Sbjct 5846 CGACTTGCCCATCGGTGAGTCGCGCGTAGCGTAAGATTGCGCAGCGCGATTGGAGAGGCT 5787
Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966
|||||| | ||| ||| || || | ||| || || ||||| || | | |||
Sbjct 5786 CGATGATTTTGTTCGATTGGTTACAAGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTT 5727
Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026
|||| || || || ||||| || || | | || | || || || || || || |
Sbjct 5726 CCATCGTTCGGCGCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCATCTAGAA 5667
Query 333027 TGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGA 333086
| | ||||| || |||||| || || ||| ||||| ||| | |||||
Sbjct 5666 TTACAATCTTCTGCCGCCCGGCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATTC 5607
Query 333087 TCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGT 333146
|| || |||||||| | |||||||||||||| |||||||||||||| ||||| || |
Sbjct 5606 GGTTTCGTACGACGTCGATTCCGCGCTCGTCCGAGGCGTTGAGTTCGAGGACGGCTTCTT 5547
Query 333147 CGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGC 333206
| ||| || || ||||| |||||| ||||| || ||||| ||||| | |
Sbjct 5546 TGTAGGCTGCGCCTAAGAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATTC 5487
Query 333207 CGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGT 333266
||||| |||| | | | || ||||||||||| || ||| | ||||||
Sbjct 5486 CGGGCATGCCCGAGATGATTACGTGTGGCATGTTGCCATCTTTGGCGATGATTTTGAGGC 5427
Query 333267 AGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGA 333326
| | || | ||||||||| ||||||||||| | | ||||||||||||||||
Sbjct 5426 GTTCGATGGTTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCGA 5367
Query 333327 TCC 333329
||
Sbjct 5366 CCC 5364
>seq350
Length=908247
Score = 95.1 bits (104), Expect = 2e-13
Identities = 138/190 (73%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930
|| || ||||||||||| |||||| || | | ||| | |||| || |||||||||
Sbjct 655037 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 655095
Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990
|| | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | ||||
Sbjct 655096 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 655155
Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049
||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| ||
Sbjct 655156 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 655214
Query 263050 GTGGTCAACC 263059
|| |||||||
Sbjct 655215 GTCGTCAACC 655224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177775319916264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |