Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07-
28] 372 sequences; 30,276,903 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq350 215 6e-51
seq306 118 1e-21
>seq350
Length=908247
Score = 215 bits (238), Expect = 6e-51
Identities = 375/532 (70%), Gaps = 10/532 (2%)
Strand=Plus/Plus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326
|||||||| || || || ||||||| || |||| |||||||| || | ||| |
Sbjct 653892 AAGTACTTCACACATGCTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTA 653951
Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386
| ||||||| ||||||| |||||||||||| || || || |||||||| || |||
Sbjct 653952 GCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTC 654011
Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCG-AACGT 53445
||| |||||| ||||||||| | || ||||| ||| | || || || ||| |
Sbjct 654012 AAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGGTCTTCA-TGTTCACAACAT 654070
Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505
| | || | ||| || || || || |||||| || | || | || || ||
Sbjct 654071 CAGGGCCACAGGCTCATACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAAT 654130
Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGG 53564
||| || |||| |||||||| || || ||||| |||||||||| ||||| | |||
Sbjct 654131 GCTACGAGTCTATAACAACACTGCTCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGG 654190
Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624
| | || ||||||||||| ||||||||||| || ||| | ||| |||| | || || |
Sbjct 654191 TG-CTTTTGCCATCTACCTTGAGCCGTGGCATGCAGACGTCATGCAGTTCATGGACCTTC 654249
Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGAT 53682
| ||| || || | ||||| | || ||| || || |||| ||| ||||| |||||
Sbjct 654250 GCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCGCGATTTGTTCTAC-GCTCTCTGGAT 654307
Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC-CTGATGTGCCCGA 53741
||| || ||||| ||||| || || || ||| | | | | || ||||||||||| |
Sbjct 654308 TCCCGATCTCTTTATGCAGCGTGTCGAACAGAACG-GCACTTGGACTCTGATGTGCCCCA 654366
Query 53742 ACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTA 53793
|||| ||||| || || || ||| |||||||| ||||| || ||| ||||
Sbjct 654367 ACGAATGCCCTGGTCTGTCGGATGTTTACGGTGACGAGTTCAAGGAGCTGTA 654418
Score = 87.8 bits (96), Expect = 2e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| || ||||| ||||| |||||||| || ||||| | ||||||||||||
Sbjct 655089 CGCAACTCGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTT 655148
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579
|||||| |||||||| ||||| | |||||| |||
Sbjct 655149 AACGAGTGCTTCGAGCCATACACAAGCAACATTTAC 655184
>seq306
Length=1930162
Score = 118 bits (130), Expect = 1e-21
Identities = 185/265 (70%), Gaps = 0/265 (0%)
Strand=Plus/Minus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|| |||||||| || || ||||| || ||||| |||||||||| || ||||| || | |
Sbjct 1469315 CCGGTTCCGATGCCATCAGCACCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 1469256
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
|| || || | | |||||||| ||| |||| | |||| ||| | || ||| |
Sbjct 1469255 TCCGGTTCGATGGTCTTGCCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTGG 1469196
Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331
| || || | | | || | || | ||| | |||||||||| || || |||
Sbjct 1469195 TGAAAGATCGCCCTCGCAAGTGGAGACAGTCTCGTGTATATGTAACGAGGACTGGCCGCA 1469136
Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391
|| |||||||| ||||| | || || | ||||||||||| | || ||||| ||||
Sbjct 1469135 TCGTTGCCACCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATGTTCATGTTG 1469076
Query 117392 TTGGCGCCCACAAAGTTTTGAGCCA 117416
|||| ||||| ||||| |||||||
Sbjct 1469075 TTGGAACCCACGAAGTTCTGAGCCA 1469051
Score = 107 bits (118), Expect = 2e-18
Identities = 281/424 (66%), Gaps = 10/424 (2%)
Strand=Plus/Minus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
||||| |||||||| || |||||||||| ||| |||||||||| || || | || | |
Sbjct 1469315 CCGGTTCCGATGCCATCAGCACCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 1469256
Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994
||||| || | | ||| ||||| || | ||| ||| | | | || | |
Sbjct 1469255 TCCGGTTCGATGGTCTTG-CCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTG 1469197
Query 151995 ATCGAATATC--CGTCG--AGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGG 152050
| || ||| | ||| ||| ||| || | |||| | ||||| || | ||||
Sbjct 1469196 GTGAAAGATCGCCCTCGCAAGT----GGAGACAGTCTCGTGTATATGTAACGAGGACTGG 1469141
Query 152051 CCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGA 152110
||||||| ||||||||| ||| || | |||||| | ||| |||||||||| ||| |
Sbjct 1469140 CCGCATCGTTGCCACCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATGTTCA 1469081
Query 152111 GGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTT 152170
|||||||| |||||||| |||||||||| | | || || |||||| | |
Sbjct 1469080 TGTTGTTGGAACCCACGAAGTTCTGAGCCAGACCGATGATGGTTTGCTGCAGTGATGTCT 1469021
Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGT 152230
|||||| | || || || | | | || | || |||| || | ||||||| | |
Sbjct 1469020 CACCGTACGGGTATGCGGTGAGGCCGGAGACTGAACCAGCCAGCTCCACCACCTTGACAT 1468961
Query 152231 CCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAAC 152290
| || ||||||| || ||| | ||| || || || ||||| || ||||| |
Sbjct 1468960 CTTTCTTCAGGTTGCGGCGGAAACATGTGTACATGACTTTTCGCTGACCCGGCTTCAAGC 1468901
Query 152291 CGTC 152294
||||
Sbjct 1468900 CGTC 1468897
Score = 95.1 bits (104), Expect = 1e-14
Identities = 242/360 (67%), Gaps = 14/360 (4%)
Strand=Plus/Minus
Query 152757 CACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGT 152816
||| || || | ||||| || || ||||||||||| || || || ||||| |||||
Sbjct 1468431 CACTTGCAAGAAGTTGATGAGCAGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGT 1468372
Query 152817 CATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTT 152875
||||||||||||| | || || |||| | | |||| | |||| |||| |||||
Sbjct 1468371 CATGATCATCAGATGGCCATAACGCAAG-CCTTTAGTATCTGTGTAGTCCTTCTTATGTT 1468313
Query 152876 GAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCG 152935
| || || | | ||| |||| ||| || || | || | | | ||| | | |
Sbjct 1468312 GCAGACCCAAAAACTTCTTGATGTTCTGAATCTCGGCGTTCTTTGAAATCTGGTCGATGG 1468253
Query 152936 TGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGC 152995
||||| || |||||| | ||| ||||| ||||| || || || ||| || ||
Sbjct 1468252 AAGCATCGCGCACATTGAGAATCTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGT 1468193
Query 152996 CTACAAC-GCTCAGACCGGCAATAGCAAG---GGCTTTCGCCGAGTCACCCTCGGTGATA 153051
||||| |||| | || |||| |||||| ||| || |||||||| || || |
Sbjct 1468192 TGACAACAGCTC-GCCCTGCAAGAGCAAGCAAGGC---GGCAGAGTCACCTTCTGTCAAG 1468137
Query 153052 ATAAGCGTACAGTCGTGAGACCG--ATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109
|| || || || | || ||||| | ||||||||| ||||||||| ||||||||
Sbjct 1468136 ATGAGTGTGCA--CTTGTGACCGTCCTTCGTACCGGCCTTGTTGGCGTCTGTAAGCTTGG 1468079
Score = 87.8 bits (96), Expect = 2e-12
Identities = 90/115 (78%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTG-CT 119132
|||| | | ||||| ||||||||||||||||||||||| ||||| ||| | || ||
Sbjct 1467270 ACTGTAGATGTTGGTAAGCTTGGCACCGTATCCGTTCCGGCCACCAGTC-GTCTTTGCCT 1467212
Query 119133 CCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187
||||||||| ||||||||| || | |||||| || ||||| | |||||| ||
Sbjct 1467211 CCTCGTCGTCGTAGTTGGACGAAGTAAGAAGGTGACCGAAGATCATCTCGGGAAT 1467157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547213455445600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |