Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07-
28] 372 sequences; 30,276,903 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq350 197 2e-45
seq110 176 5e-39
seq43 127 2e-24
seq306 104 3e-17
seq21 98.7 1e-15
>seq350
Length=908247
Score = 197 bits (218), Expect = 2e-45
Identities = 803/1242 (65%), Gaps = 39/1242 (3%)
Strand=Plus/Minus
Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598
||||||||||||| ||| | ||||| ||| | ||||| || | | | ||||||||
Sbjct 655024 CCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAA 654965
Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCA 80658
|| || | ||| || ||||| || || || ||| || || ||||| ||| ||||
Sbjct 654964 GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCA 654905
Query 80659 AAGACGCCCTTGTTCA-CACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717
|| | | || | | || | |||| || |||||| | || || | ||
Sbjct 654904 AAAATCTGGATATTAAGCTCCTTG-GCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAA 654846
Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777
||| | ||||| || || | || || | | || || |||||||| ||| | ||
Sbjct 654845 GAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTT-GCTCT 654787
Query 80778 CTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836
||| ||||| || | |||||| |||| | |||||| ||||||||| ||||| |
Sbjct 654786 TTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGA 654727
Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCCCTTCACAA--- 80890
| || || || || |||||||||| ||||| || | |||| | | | |
Sbjct 654726 CCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGT 654667
Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACT 80950
| | || || || || ||||||||||| || || ||||| || | | | | |||
Sbjct 654666 AGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACT 654607
Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010
| | ||| || |||||||||||||| ||| || || || || || ||||| || ||
Sbjct 654606 CCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCT 654547
Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070
|| |||| ||||||||||| ||| | || || ||||||||| ||| | || ||
Sbjct 654546 TGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGA 654487
Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130
| || || | ||| || | | || ||| || ||| |||||||| | |||
Sbjct 654486 GAATAGCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCAT 654427
Query 81131 ACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189
| |||| ||| || | ||||| | |||||| || || | || | ||||| |||
Sbjct 654426 AACGCTCGTACAGC-TCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCG 654368
Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTC---TCTACAGCCTTCATGAAAGCG-TC 81245
|| ||||||||||| ||| ||| ||||| || ||| || ||| |||| | ||
Sbjct 654367 TTGGGGCACATCAGAGTCCA---AGTGCCGTTCTGTTCGACACGCTGCAT-AAAGAGATC 654312
Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGA 81304
|| |||||||| ||| ||||| ||||| ||| || | || || | || |||||
Sbjct 654311 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCA-CGAACTTCTTCCTTTCCATGGTTCT 654253
Query 81305 GGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG 81364
||| | || | || | ||||| ||| |||||||| ||||| || || | ||| | |
Sbjct 654252 TGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAG 654193
Query 81365 ACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACAC 81418
| ||| |||| ||||||||||| |||||||| ||||| |||| | || |
Sbjct 654192 -CACCT--GGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTC 654136
Query 81419 GCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGG 81478
| | ||| || | | ||| | || ||||| || || | || || || |||
Sbjct 654135 GTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGG 654076
Query 81479 CGCGCACCTTGCTGA--TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536
| | | ||| ||| || |||||| || || || | ||| || ||| |||||
Sbjct 654075 CCCTGATGTTG-TGAACATG-AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACA 654018
Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596
|| | ||| || || || || || ||||| || | |||||| | | |||||| ||
Sbjct 654017 TATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCA 653958
Query 81597 GCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATG 81654
| || | || | || | | | | || ||| |||| |||||||| | || || ||
Sbjct 653957 GGATGCTAGCT--GCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTG 653900
Query 81655 AAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGA 81714
|| || ||||| || || || || | | | ||| || || || |||
Sbjct 653899 AAGTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGA 653840
Query 81715 ATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756
|| |||| ||| |||||||| | ||| | || || |||||
Sbjct 653839 ATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCG 653798
>seq110
Length=2131064
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| ||||| |
Sbjct 668320 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 668379
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || || |||||||||||||| || || || ||||||
Sbjct 668380 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 668439
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || |||||||| || ||||| |||||||||| |||||| || | ||||| ||
Sbjct 668440 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 668499
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || ||||| ||||| || | || | ||||| || |||||
Sbjct 668500 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGG 668546
Score = 141 bits (156), Expect = 1e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| ||||| || ||||||||||| || | ||| | ||| |||||
Sbjct 668116 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGAGC 668175
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||| ||||| || ||||| || |||||||| || | ||||| || || |||
Sbjct 668176 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 668235
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||| | ||| ||||| | ||||| || | || ||||| |||||| |||
Sbjct 668236 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCCAT 668295
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | |||||||| |||||
Sbjct 668296 CTCGTCCTCCGTCTTCGTGGTGG 668318
Score = 132 bits (146), Expect = 5e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || ||||||||||| || || || || || || |||
Sbjct 668548 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 668607
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || || ||||||||||| || || || ||||||
Sbjct 668608 GACACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 668667
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||| | || || || | || || ||
Sbjct 668668 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAAC 668727
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636
|||| ||||| |||||||| || | || ||||||| || || || |||
Sbjct 668728 ATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGTCTCCGTGGAGGCCAA 668778
>seq43
Length=625496
Score = 127 bits (140), Expect = 2e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467
||| | ||| || ||||| || || |||||||| || || || ||||| ||||| | ||
Sbjct 14226 GCACAGCTTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGA 14167
Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527
| ||| | ||| | ||| || || ||||||||||||||||| || || ||||||||
Sbjct 14166 CACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCA 14107
Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587
|||| | || || ||||| ||||| | ||||||| ||| ||||| | ||||| || |
Sbjct 14106 GCGTTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACAT 14047
Query 27588 CCAAAAGG 27595
||| ||||
Sbjct 14046 CCAGAAGG 14039
>seq306
Length=1930162
Score = 104 bits (114), Expect = 3e-17
Identities = 279/423 (66%), Gaps = 8/423 (2%)
Strand=Plus/Plus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043
|||||| | ||||| ||||| || || || ||| | || || |||||| |
Sbjct 1468897 GACGGCTTGAAGCCGGGTCAGCGAAAAGTCATGTACACATGTTTCCGCCGCAACCTGAAG 1468956
Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103
| || | ||||||| | ||||| | || | || | | | || || || | ||
Sbjct 1468957 AAAGATGTCAAGGTGGTGGAGCTGGCTGGTTCAGTCTCCGGCCTCACCGCATACCCGTAC 1469016
Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163
|| ||| | || || ||| ||||| || || ||||||||||| || ||| | ||
Sbjct 1469017 GGTGAGACATCACTGCAGCAAACCATCATCGGTCTGGCTCAGAACTTCGTGGGTTCCAAC 1469076
Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223
||| ||||| | |||||||| ||| | ||||| | || || |||||||| |||
Sbjct 1469077 AACATGAACATCCTCGAGCCGAGTGGCAATTTTGGATCACGTCTGCAAGGTGGCAACGAT 1469136
Query 32224 GCTGCGAGCTCCCGTTACATCTTCAC----CCGTCTCGCACCTTCGACGCGCAAGATTTT 32279
|| || || | |||||||| | ||| | ||||| ||| | ||| | || ||| ||
Sbjct 1469137 GCGGCCAGTCCTCGTTACATATACACGAGACTGTCTC-CACTTGCGA-GGGC--GATCTT 1469192
Query 32280 CGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCC 32339
||| | || || ||| |||| | |||||| || ||||| || |||| ||
Sbjct 1469193 TCACCAGAGCGATGAAGCGCTGCTGACGTACAACACCGACGACGGCAAGACCATCGAACC 1469252
Query 32340 GGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAAC 32399
|| | | || ||| | | ||||||||| || | |||||||| || |||||||||||
Sbjct 1469253 GGAGATGTATGTTCCAATCTTGCCGATGATCCTGATCAACGGTGCTGATGGCATCGGAAC 1469312
Query 32400 GGG 32402
||
Sbjct 1469313 CGG 1469315
>seq21
Length=785934
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||||||||| || ||||||||||| | || || || || ||||| ||||||
Sbjct 583045 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 582986
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || ||||| | ||||| || | || ||||| ||| || || || ||| |
Sbjct 582985 GATGGCCGCACCCTCTCCGACTACAACATTCAGAAGGAGAGCACCCTCCACCTCGTCCTC 582926
Query 27619 CGTCTTCGCGGTGG 27632
||||| || |||||
Sbjct 582925 CGTCTGCGTGGTGG 582912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570307748056640
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