Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236465.1_202017-07-
28] 372 sequences; 30,276,903 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq350 140 5e-28
seq328 134 2e-26
>seq350
Length=908247
Score = 140 bits (154), Expect = 5e-28
Identities = 462/715 (65%), Gaps = 10/715 (1%)
Strand=Plus/Minus
Query 76523 AATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCAC 76582
|| || || || ||||||| || |||||| ||||| || || ||||||| | |||
Sbjct 654406 AACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAA 654347
Query 76583 TCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 76642
|| | | | || || | |||||||||||| || ||||| ||||| || | |
Sbjct 654346 GTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAA 654287
Query 76643 TCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702
|| || | | | |||||| ||||| ||||| ||| || | ||||| ||| |
Sbjct 654286 TCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACG 654227
Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762
|| | |||||| || || || || || || | | |||| || || || || || |||||
Sbjct 654226 TCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGG 654167
Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822
|| | || | |||||||| ||||| |||| | |||||| | || ||||| |||||
Sbjct 654166 TCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTG 654107
Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882
|| ||||| || ||| || || || | || || || | || || ||
Sbjct 654106 CCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATA 654047
Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942
|| || || | || ||||| | ||||| || | || || ||||| || || ||
Sbjct 654046 CCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATG 653987
Query 76943 CTATCATCCATCATG----TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 76998
|| |||||| ||||| |||||| | ||||| || || || ||
Sbjct 653986 CTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG----CTGCGCCTGTGGGGTACC 653931
Query 76999 TGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA-AAGTAGATTGTATG 77057
||| | || | ||| || || ||||| ||||| | || || | |||| |||||||
Sbjct 653930 AGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAG-TTGTATG 653872
Query 77058 TTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117
| ||||| ||||||| || || |||||| || ||||| |||||||| | ||| |
Sbjct 653871 TCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCT 653812
Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177
| || |||| || || ||| | ||| | | | ||||||| |||| ||| |
Sbjct 653811 GTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGATCGCTCCAGAGTCT 653752
Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232
| || || || || | ||| ||||| | || || | ||| |||| || ||
Sbjct 653751 TGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCAG 653697
>seq328
Length=1424114
Score = 134 bits (148), Expect = 2e-26
Identities = 546/851 (64%), Gaps = 12/851 (1%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|| ||||| || || ||||| |||||||| || || || ||||| ||| || || ||
Sbjct 198340 TTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTC 198399
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| || || || || || || | || || | || || || | | || | |
Sbjct 198400 TCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCTAACAGT 198459
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|| | ||| || |||||||| || || | ||| | || ||||| || | ||
Sbjct 198460 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 198519
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578
||| || ||||| || || | ||||| || || || ||||| || || | || ||
Sbjct 198520 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGAT- 198578
Query 46579 GATGTT-ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
| | | || ||| | || | | ||| ||| |||| | || || ||
Sbjct 198579 GCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 198638
Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697
|| || | ||| ||||| | || | ||||| || ||||||||||| | |||
Sbjct 198639 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 198698
Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757
|| ||||| || || ||||| || ||||| || ||||||||||| ||||| || || ||
Sbjct 198699 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTC 198758
Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCT 46814
|| || || ||||| | || | || | | | | || | | ||||| |
Sbjct 198759 AACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCG 198818
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
||||| |||||||| | | || || || | || || ||||| || || |
Sbjct 198819 CAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGTA 198878
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
|| | | || | | |||||||| || | ||| ||| | || || ||
Sbjct 198879 TGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAGTG 198938
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
||||| || || ||||| || ||||| || |||| ||| || | ||||| |||||
Sbjct 198939 GATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCTC 198998
Query 46995 TGTACAAAATCGTTCAGACAAA-TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATG 47053
| | || || || ||| | ||||| || || || ||||| || || || ||||
Sbjct 198999 AGAGCTGAAGCGCTC-GACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATG 199057
Query 47054 CCAATACATGTTTAATAAAATATTTTTCATCG--GT--AGTCAGTTTATTCCAGTCATTG 47109
| | || ||| || || || ||| ||| || |||| | || |||||||| | |
Sbjct 199058 CGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTC-GCTTGTTCCAGTCGTGG 199116
Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169
| ||| || || | ||| | || ||||||||||||||||| ||||| || ||||| |||
Sbjct 199117 AGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTAC 199176
Query 47170 ATATTCCATAT 47180
|| | ||||||
Sbjct 199177 ATTTGCCATAT 199187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712931084855040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |