Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07- 28] 296 sequences; 30,157,647 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq228 129 1e-24 >seq228 Length=310920 Score = 129 bits (142), Expect = 1e-24 Identities = 418/638 (66%), Gaps = 12/638 (2%) Strand=Plus/Plus Query 94393 CCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCG 94452 || |||||||| |||||| |||||||| | |||| ||||| || || | || || Sbjct 234891 CCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCC 234950 Query 94453 GAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCC-TTC-ACTC 94510 || || |||||||| |||| |||||||||||| | |||| | || | ||| || | Sbjct 234951 GACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTG--CCGTTCTGTTCGACAC 235008 Query 94511 TCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTT 94570 || ||| |||||||| | | ||||| ||| ||| | ||| | || | | |||| Sbjct 235009 GCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTT 235068 Query 94571 CATTACCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCAGAAA 94630 | || || ||||| | ||| || || | | | ||||| |||||| || Sbjct 235069 CCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAA 235128 Query 94631 TATAGATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGAGA 94690 |||||||| ||| ||| | ||||| || |||||| ||| | ||| | Sbjct 235129 GGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGT 235188 Query 94691 CGTTAAAGATTTGGAGGAACGCCATGAGACCAGGGTGG--GTACCACTCCATGACGA-AA 94747 |||| ||| | | || | | | ||||| | ||| || || | || || || Sbjct 235189 TGTTATAGACTCGTAGCATTGGTACAAGACC--GTTGGATGTGCCGTTTG-TGCCGCCAA 235245 Query 94748 TGGGGCTTCCTTTTGCCCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGG 94807 || ||| | ||||| | | |||| || | || | || ||||| |||||| Sbjct 235246 TGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGG 235305 Query 94808 AGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGC 94867 |||| || || ||| || ||||| || ||||| |||||||| ||||| | | | Sbjct 235306 AGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGG 235365 Query 94868 CCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACAATTAAACAGTGTGGGG 94926 ||| | |||||| || | || || | |||| || ||| | | || ||||| || Sbjct 235366 CCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGG-GTACCAGCACTGAAAAGTGTTGGC 235424 Query 94927 GAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATG 94986 |||||||| || || || | | ||||||| | ||||| ||||| | | || ||| Sbjct 235425 GAAGCATGTGTGAAGTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCTTCAATG 235484 Query 94987 TCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 ||| || ||||||||||||||||||||||| ||||| Sbjct 235485 TCTTCCCCATGAATGCCGACAGCCACACGCATGATCAT 235522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989580247002680