Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq228 179 5e-40
>seq228
Length=310920
Score = 179 bits (198), Expect = 5e-40
Identities = 636/981 (65%), Gaps = 32/981 (3%)
Strand=Plus/Plus
Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795
|||| || |||||||| || || || ||||||| | | | | || | || ||||||
Sbjct 234681 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCA 234740
Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855
||||| | |||| | ||||||||| || | ||| | ||||| ||||| |||
Sbjct 234741 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCG 234800
Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915
|| ||||| || |||||||| || || || || || |||| | || | ||| || | |
Sbjct 234801 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 234860
Query 65916 CAGAC-----GA-CTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTAT 65966
|| | || | ||| || | | | | | ||| |||||| || ||
Sbjct 234861 CATATTTTCTGAGCACGAACCGTC-TCACGG--------CCCTTGCCTTCTCTCTCATAA 234911
Query 65967 AGTGTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 66025
| |||| || || ||||||||| || |||||| || ||||| ||||| |
Sbjct 234912 CGCTCGTACAGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTT 234970
Query 66026 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 66085
|| ||||||| | ||| |||| | | || || | |||||||||||| |||||
Sbjct 234971 GGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAAT 235030
Query 66086 CCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 66145
||| ||||| || ||||| | | | | ||| || ||||| ||||| |||
Sbjct 235031 CCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAG 235090
Query 66146 ATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 66205
|| | |||| ||| | || ||||||||| || | ||| ||||| | | | || ||
Sbjct 235091 GTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGG 235150
Query 66206 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 66265
|| ||||| || ||||| || | ||| | ||| ||||| ||||| |||| | ||||||
Sbjct 235151 ACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGG 235210
Query 66266 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATT 66325
| || ||| |||||||| || || || ||| || || || | || | || ||
Sbjct 235211 TACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTT 235270
Query 66326 ACTAA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384
|| ||| ||||| || || || || | || ||||| | || ||| || | |
Sbjct 235271 GTGAACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGG 235329
Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444
|||| ||||| || || || || |||||| ||||| | | || ||| || |
Sbjct 235330 TATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTA 235386
Query 66445 GGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 66500
| || || || || || ||| | || | || || ||||| || || || | ||
Sbjct 235387 GCTG-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTC 235445
Query 66501 TCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 66559
|| | |||| ||||| |||||||| |||| || || || |||||| || ||
Sbjct 235446 AACGACATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGAC 235504
Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 66619
|| |||||||| | ||| || || ||||| || | | |||| || ||| | | |
Sbjct 235505 AGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAG 235564
Query 66620 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 66679
||| ||| |||| ||| || || || || || | ||| ||||| || || || |
Sbjct 235565 GTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGAC 235624
Query 66680 AATAACCGAGTTGAGTTTATC 66700
||| ||||||| || | |||
Sbjct 235625 AATGGCCGAGTTCAGCTCATC 235645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658170364760640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |