Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq228 167 3e-36
>seq228
Length=310920
Score = 167 bits (184), Expect = 3e-36
Identities = 628/972 (65%), Gaps = 26/972 (3%)
Strand=Plus/Plus
Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680
|| |||||||| || || || ||||||| | | | | || | || || ||||||||
Sbjct 234687 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 234746
Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740
| ||| | ||| ||||| || | ||| | ||||| ||||| ||| || |||
Sbjct 234747 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 234806
Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC- 79799
|| || |||||||| || || || || || |||| | || | ||| || | ||| |
Sbjct 234807 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 234866
Query 79800 ----GA-CTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATAT 79854
|| | ||| || | | | | | | | |||||| || || | ||
Sbjct 234867 TTCTGAGCACGAACCGTC-TCACGGCCCT-----TGCCTTCTCTCTCATAACGCTCGTAC 234920
Query 79855 AA-TCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913
| || || ||||||||| || ||||||| | ||||| ||||||| || |||||
Sbjct 234921 AGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACAT 234979
Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973
|| | ||| || | | | || || | |||||||||||| |||||||| |||||
Sbjct 234980 CAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGC 235039
Query 79974 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033
|| | ||| | | | | || || ||||| ||||| ||| || | |||
Sbjct 235040 GTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAA 235099
Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093
| ||| | || | ||||||||| || | ||| ||||| | | | || || || |||||
Sbjct 235100 CTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTT 235159
Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153
|| ||||| || | ||| | ||| ||||| ||||| |||| | |||||| | || |||
Sbjct 235160 GCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACC 235219
Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA-TTG 80212
|||||||| || || || ||| || || || |||| | || || || ||
Sbjct 235220 GTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATG 235279
Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272
| ||||| || || || || | || ||||| | || ||| || | ||||| ||||
Sbjct 235280 A-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGA 235338
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332
| || || ||||| ||||| ||||| | | || ||| || | | || || |
Sbjct 235339 TACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCTG-CGCC 235394
Query 80333 T----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-G 80387
| || || ||| | || | || || ||||| || || || | || |||| |
Sbjct 235395 TGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATG 235454
Query 80388 TAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACG 80447
||| ||||| |||||||| |||| ||| || || |||||| || || || |||||
Sbjct 235455 TAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACG 235513
Query 80448 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTT 80507
||| | ||| || || ||||| || | | |||| | ||| | | | ||| |||
Sbjct 235514 CATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGATCG 235573
Query 80508 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 80567
|||| ||| || || || || || | ||| ||||| || || || | ||| ||||
Sbjct 235574 CTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGA 235633
Query 80568 GTTGAGTTTATC 80579
||| || | |||
Sbjct 235634 GTTCAGCTCATC 235645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718266142405440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |