Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq228 156 6e-33
>seq228
Length=310920
Score = 156 bits (172), Expect = 6e-33
Identities = 733/1150 (64%), Gaps = 22/1150 (2%)
Strand=Plus/Plus
Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757
|||| || |||||||| || || || ||||||| | | | | || | || || |||
Sbjct 234681 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCA 234740
Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817
||||| | |||| | ||||||||| || | ||| | ||||| ||||| |||
Sbjct 234741 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCG 234800
Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877
|| ||||| || ||||| || || || || || || |||| | || | ||| || | |
Sbjct 234801 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 234860
Query 71878 CAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT---TTCTCTTTCGTATTGTGTA 71934
|| | |||| | | | | | ||| |||||| || || |
Sbjct 234861 CATATTTTCTGAGCACGAACCGTCTCACGG---CCCTTGCCTTCTCTCTCATAACGCTCG 234917
Query 71935 TATAA-TCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACA 71993
|| | || || ||||||||| || || ||| | ||||| ||||| || || ||
Sbjct 234918 TACAGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCA 234976
Query 71994 CATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 72053
||||| | ||| || | | | || || | |||||||||||| |||||||| ||
Sbjct 234977 CATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAG 235036
Query 72054 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 72113
||| || | ||| | | | | || || ||||| ||||| ||| || |
Sbjct 235037 AGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCAT 235096
Query 72114 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTT 72173
|||| ||| | || | ||||||||| || | ||| ||||| | | | || || || ||
Sbjct 235097 GAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTT 235156
Query 72174 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 72233
||| || ||||| || | ||| | ||| ||||| ||||| |||| | |||||| | ||
Sbjct 235157 GTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAG 235216
Query 72234 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAA- 72292
||| ||||||| || || || ||| || || || |||| | || ||| ||
Sbjct 235217 ACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAAC 235276
Query 72293 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCAT 72352
||| ||||| || || || || | || ||||| | || ||| || | ||||| |
Sbjct 235277 ATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGT 235335
Query 72353 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 72412
|||| || || || || |||||| ||||| | | || ||| || | | || |
Sbjct 235336 AGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCTG-C 235391
Query 72413 GACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 72468
| || || || ||| | || | || || ||||| || || || | || |||
Sbjct 235392 GCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGAC 235451
Query 72469 A-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGAC 72527
| |||| ||||| |||||||| |||| ||| || || ||| || || || || ||
Sbjct 235452 ATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCAC 235510
Query 72528 ACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGA 72587
|||||| | ||| || || ||||| || | | |||| | ||| | | | ||| ||
Sbjct 235511 ACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGA 235570
Query 72588 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 72647
| |||| ||| || || || || || | ||| ||||| || || || | ||| |
Sbjct 235571 TCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGC 235630
Query 72648 CGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT-TGAAATAATCG 72706
||| || || | ||| | || | || | | || | || ||| || || |
Sbjct 235631 CGAGTTCAGCTCATCTGAGTGCTTCATGACGGTCGCGTACGT-CTCCTCTGAGATCATGG 235689
Query 72707 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 72766
||| | || || | || ||||| | || | ||| ||||| | || || |
Sbjct 235690 GAGCCTTCTTGCCCGTCTTTGGATTGATGTATGCGTATAGATCCTGGACAACAGCAGAGA 235749
Query 72767 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCAT 72826
|| | || || || | |||||| || || || ||||| || | ||||| || || ||||
Sbjct 235750 ATTGCTTCTTGGTCTGCTTGTGGAGGTTGGACACGGCGATACGCGCGGCGAGGATCGCAT 235809
Query 72827 AATCTGGATG 72836
||||||| ||
Sbjct 235810 AATCTGGGTG 235819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671136716784960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |