Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq253 93.3 4e-14
>seq253
Length=1263309
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||| | ||| ||||| || || | ||| || ||| || ||| ||||||
Sbjct 702685 CACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTC 702626
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || |||| || | | ||||| || || || ||||| || ||||| |
Sbjct 702625 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 702566
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTT 94975
|| || | |||||| | ||| ||||| || ||| ||||| || | ||||||||
Sbjct 702565 GATCTTCGACTTGACATTGTCGATGGTGTC-GC-TGGACTCGACCTCGAGGGTGATGGTC 702508
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || || |||||||||||
Sbjct 702507 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 702476
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TGG 94850
|||| ||||||||||| ||| || ||||| || | ||| |||| | | ||||| |
Sbjct 702918 CGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAAT--CCGAAAGTGTCCGGC 702861
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||||| ||||| || ||| | ||||| | | ||||| || || || || || || |
Sbjct 702860 CGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCT 702801
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | || |||| ||||||| | ||| ||||| | || || || | ||||
Sbjct 702800 TGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGA 702741
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| || || || || || || || || || |||||
Sbjct 702740 TGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 702704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289541322560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |