Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq228 178 2e-39
>seq228
Length=310920
Score = 178 bits (196), Expect = 2e-39
Identities = 634/978 (65%), Gaps = 26/978 (3%)
Strand=Plus/Plus
Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951
|||| || |||||||| || || || ||||||| | | | | || | || ||||||
Sbjct 234681 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCA 234740
Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011
||||| | |||| | |||||| || || | ||| | ||||| ||||| |||
Sbjct 234741 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCG 234800
Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071
|| ||||| || |||||||| || || || || || |||| | || | ||| || | |
Sbjct 234801 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 234860
Query 63072 CAGAC-----GA-CTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGT 63125
|| | || | ||| || | | | | | | | |||||| || || |
Sbjct 234861 CATATTTTCTGAGCACGAACCGTC-TCACGGCCCT-----TGCCTTCTCTCTCATAACGC 234914
Query 63126 GTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 63184
|||| || || ||||||||| || |||||| || ||||| ||||| | ||
Sbjct 234915 TCGTACAGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGG 234973
Query 63185 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63244
||||||| | ||| |||| | | || || | |||||||||||| ||||||||
Sbjct 234974 GCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 235033
Query 63245 AAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63304
||||| || | ||| | | | | ||| || ||||| ||||| ||| ||
Sbjct 235034 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 235093
Query 63305 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364
| |||| ||| | || | ||||||||| || | ||| ||||| | | | || || ||
Sbjct 235094 CATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 235153
Query 63365 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63424
||||| || ||||| || | ||| | ||| ||||| ||||| |||| | |||||| |
Sbjct 235154 CTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTAC 235213
Query 63425 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACT 63484
|| |||||| ||| | || || || ||| || || || |||| | || ||
Sbjct 235214 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTG 235273
Query 63485 AA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGT 63543
|| ||| ||||| || || || || | || ||||| | || ||| || | || |
Sbjct 235274 AACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTAT 235332
Query 63544 CATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63603
| |||||||| || ||||| ||||| ||||| | | || ||| || | | |
Sbjct 235333 CGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCT 235389
Query 63604 GACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63659
| || || || || ||| | || | || || ||||| || || || | ||
Sbjct 235390 G-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAAC 235448
Query 63660 GA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63718
|| | |||| ||||| |||||||| |||| || || || |||||| || || ||
Sbjct 235449 GACATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGC 235507
Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778
|||||||| | ||| || || ||||| || | | |||| || ||| | | | |||
Sbjct 235508 CACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTA 235567
Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
||| |||| ||| || || || || || | ||| ||||| || || || | |||
Sbjct 235568 TGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAAT 235627
Query 63839 AACCGAGTTGAGTTTATC 63856
||||||| || | |||
Sbjct 235628 GGCCGAGTTCAGCTCATC 235645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622944895095360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |