Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq228 304 3e-77
seq177 89.7 1e-12
seq286 87.8 5e-12
seq221 86.0 2e-11
>seq228
Length=310920
Score = 304 bits (336), Expect = 3e-77
Identities = 1157/1795 (64%), Gaps = 52/1795 (3%)
Strand=Plus/Minus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449
||||| | ||||| ||||| ||| ||||| |||| | || | || | ||| ||
Sbjct 235594 TTCGGCTTCAAGACTCTGGAGCGATCATACCT-TCTCAGAATTGACGGCAAGGTTGCCGA 235536
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
| ||||| || ||| | |||||||| ||| | || || ||| | || |||| ||
Sbjct 235535 GAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGC 235476
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGT----GTA-TTCACGCACGCCACGCCA 363564
|||||||| ||||| || ||| || |||| ||| ||||| || || |||||
Sbjct 235475 AGCGATTGAGACATACAA----CTACATG-TCGTTGAAGTACTTCACACATGCTTCGCCA 235421
Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624
||| | | || |||||| || | | | ||| | | || ||||| | | |||
Sbjct 235420 ACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATG 235361
Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684
||||| || ||| || ||||||| || || || |||| ||||| | || ||||||
Sbjct 235360 AAGGATGACAGCATTGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAG 235301
Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743
|| || ||||| |||||| | | ||||| | | || |||| | |||||| |
Sbjct 235300 AACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGG-CTCATACATTGG 235242
Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
||||||| || || || || || || || ||||| || || | | |||| |||||
Sbjct 235241 CGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGC 235182
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| ||||| ||||||||||| ||||| ||| || ||||| || || || |||||
Sbjct 235181 TCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCC 235122
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
||||| || | | |||| | || || || || ||| ||||| || ||| |
Sbjct 235121 GTGGCATGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGT 235062
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| || ||| ||||||| || || ||| || | || | |||||| |||| || ||
Sbjct 235061 TCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGA 235002
Query 363984 GGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042
||| | | |||| | || | ||||| ||||||| || ||||| || ||||| |
Sbjct 235001 -ACAGAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTT 234943
Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102
|||||||| | | || ||||| ||||| || || |||| ||| |||
Sbjct 234942 ACGGTGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGA 234883
Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162
| ||| || ||||| |||||| ||| || | || |||||| ||||| || ||||
Sbjct 234882 CGGTTCGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACAC 234823
Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222
| | || ||||||| || | |||||||||| ||| ||| || | ||||| || |
Sbjct 234822 CTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCA 234763
Query 364223 TTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
||| ||||| || | || || ||||| || || ||| | ||||| || ||| |
Sbjct 234762 -TCA--AGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCG 234706
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGATGGTAC 364331
| || || || || || ||| | || || || | | || | || |||
Sbjct 234705 CTGTCTGCAATCTGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGT-- 234648
Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391
||||||| | || | ||| | || || ||| | | || | || || |||||
Sbjct 234647 TTTTGACTTCAAGAAACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGAC 234588
Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCC 364450
||||| | || || || ||| | || || || ||| | | || | || || || |
Sbjct 234587 CATCGAGATCAACTACTACCCAGTACCAGAGGCACGAAAGAGC-AACTTCCGCCACCGAC 234529
Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510
| |||||||||||||| | || || ||||| | || || ||| ||| |||| |
Sbjct 234528 CCATTGGTCTTGGTGTCAACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCG 234469
Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570
| |||||||| || | || |||| |||| ||||| || || ||| ||| ||
Sbjct 234468 ACTCGCCTGAGGCCAAGGAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTC 234409
Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630
| ||||| || || | || | | || ||| || || || || |
Sbjct 234408 TTGAGGCTTCATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTC 234349
Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690
| | |||||||| | |||||| || | ||| || || | | || |||
Sbjct 234348 CAGTATCGCAGGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCTCTGGG 234289
Query 364691 ACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTC---CC 364741
|||||| ||| || ||| | |||| |||| ||| |||||||| |
Sbjct 234288 ACTGGG--CCGC-AC---TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTC 234235
Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801
||||| ||||| ||||| || || || || | |||||| | || ||||||||||
Sbjct 234234 TCGTT---GCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCT 234178
Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861
|||| || | |||||||| |||| || || || || | | || || || | ||| |
Sbjct 234177 TCGAGCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAGGTCG 234118
Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921
| || | || | |||||||| |||||| || || ||| || | ||||||||
Sbjct 234117 TCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTCTGGTCAGAGAACATGAAGA 234058
Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGA 364981
|| |||||||| | ||||| || | ||| ||| || ||||||| || || |
Sbjct 234057 ACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAACATTCCAGACGACCTCA 233998
Query 364982 AGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCG 365041
|| | | ||||| ||||| ||||| || | ||| | || | | ||||| || |
Sbjct 233997 AGGCACTCTACAAGACCGTCTGGGAGATCAGCCAGCGTAACATCGTGCAGATGGCTGCTG 233938
Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101
| || |||||||||||| ||| ||| || ||| | |||| ||||||||
Sbjct 233937 ACCGTGGTGCTTTTATCGACCAGTCTCAGAGCTTGAACATCCATATGAAGGAGCCAACCA 233878
Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||| |||| |||||| ||| || ||||| |||||| ||||| ||
Sbjct 233877 TGGGCAAGATTACCAGCATGCACTTCGCTGGTTGGAAGCTCGGTCTCAAGACTGG 233823
>seq177
Length=462105
Score = 89.7 bits (98), Expect = 1e-12
Identities = 146/207 (71%), Gaps = 5/207 (2%)
Strand=Plus/Minus
Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTT-CATTCGCGGAACGTCT 22496
||||| || |||||| || |||||| |||| |||| ||||||| |||||
Sbjct 265864 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAA-GAACTCGACATTCGCCCTCCGTCT 265806
Query 22497 TATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTG 22556
||||||||||| | ||||| || || ||||| |||||| | ||| ||| ||||| ||
Sbjct 265805 CATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTG 265746
Query 22557 GCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGA 22616
||| || ||||||| | ||| | || || || || || || ||| | || ||| ||
Sbjct 265745 GCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGA 265686
Query 22617 TGAGGGTCTTCATACCGATTTTGCGTG 22643
|||||| | || || || || || ||
Sbjct 265685 TGAGGGCATGCACACAGACTTCGCCTG 265659
>seq286
Length=914684
Score = 87.8 bits (96), Expect = 5e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 65871 GTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACG 65930
|||||| | || | ||| || ||| ||| ||||| ||||| || |||| |||
Sbjct 782097 GTTACGCACAGTGCTGTCGTACTTGATCATGACTTCTTCCAAAGCCTTCACTAGACGACG 782038
Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990
||||||||||||| | | |||||| || || |||||||||| |||||||||||| ||
Sbjct 782037 CTGGATGTAACCAGTCTCTGCAGTCTTGACAGCGGTATCAATGAGACCTTCACGACCACC 781978
Query 65991 CATTGCAGAAAAGAAAAACTC 66011
||| || ||||| |||||
Sbjct 781977 CATGGCGTGGAAGAAGAACTC 781957
>seq221
Length=380394
Score = 86.0 bits (94), Expect = 2e-11
Identities = 107/145 (74%), Gaps = 4/145 (3%)
Strand=Plus/Plus
Query 111415 AAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTG 111474
|||| || | || ||||| || || || || || || | ||||| || || || || |
Sbjct 266604 AAAACGTCCACATCTGGGACGGCAACGGTTCGCGAGAGTACCTAGACTCCGTAGGCCTAG 266663
Query 111475 TCGACAACGA--AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGG 111532
|||| ||| || ||| || ||||| || || ||||| ||||||||||| ||||||||
Sbjct 266664 --GACACCGAGAAGTAGGCGACCTCGGCCCCGTCTACGGGTTTCAATGGCGGCACTTTGG 266721
Query 111533 TGCAGACTACAAAACCATGCACGAC 111557
|| || ||||||||| ||||||
Sbjct 266722 AGCCGAATACAAAACCTGCCACGAC 266746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303348657031472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |