Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq253 206 5e-48
seq177 141 2e-28
seq199 125 1e-23
seq77 89.7 9e-13
seq275 84.2 4e-11
>seq253
Length=1263309
Score = 206 bits (228), Expect = 5e-48
Identities = 182/227 (80%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || |||| |||||||| || |||||||| || |||||||| ||||| ||
Sbjct 702930 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 702871
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||||| || || || | |||||| |||||||| ||||| | || ||||| |||||
Sbjct 702870 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 702811
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||| ||||||| ||||||| ||||| ||||| | |||||| |||
Sbjct 702810 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 702751
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || ||||| ||||||||||| || |||||
Sbjct 702750 TCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 702704
Score = 156 bits (172), Expect = 8e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || || || ||||| |||||||| || |||||
Sbjct 702702 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 702643
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || || | || ||||| |||||
Sbjct 702642 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 702583
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413
|| || |||||||| || ||||| | |||||| ||||||||||| |||| | || ||
Sbjct 702582 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTC-GCTGGACTCGAC 702524
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || ||||| ||||||||||| ||||||||
Sbjct 702523 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 702476
Score = 113 bits (124), Expect = 8e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | || || ||| ||| || |||||||| || ||||||
Sbjct 702474 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 702415
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || | | ||| ||||| ||||||
Sbjct 702414 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 702355
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||| || || ||||| ||| || ||||||||||| | || || ||
Sbjct 702354 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACC 702295
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||| ||||| || || ||||
Sbjct 702294 TCGAGGGTAATGGTCTTGCCGGTGA 702270
>seq177
Length=462105
Score = 141 bits (156), Expect = 2e-28
Identities = 300/441 (68%), Gaps = 10/441 (2%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || |||||||||||||| || || |||||||||||||| |||||| |
Sbjct 265355 CATGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 265414
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGC---GCCAAACTGCTTGGGGTA 10051
|| |||||| |||||||||||| |||||||| ||| | |||| ||| ||
Sbjct 265415 CAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTT---GTT 265471
Query 10052 ACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGA 10111
|||||||| | | ||| || || ||||| || ||||| || ||| ||| | |
Sbjct 265472 GCCGAGTGCCAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGC 265531
Query 10112 GTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171
|||||| || | | ||| || | ||||| | ||| |||| ||| | | |||
Sbjct 265532 GTTCATCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGAC 265591
Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATA 10231
|| || || |||||||| || | | | || | ||||||||| || | ||| |
Sbjct 265592 GGCCTCGGTGATGATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAA 265651
Query 10232 CAGGAGCTCTCCAAACTGCTG-GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290
||| || | || | ||| ||| | |||||| || ||| ||||| |||||| || |
Sbjct 265652 CAGAAGGCAGGCGAAGT-CTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGA 265710
Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGC-GCAGAACGACCCG 10349
| || |||| |||||| || || || ||||||||| || || ||| || || ||
Sbjct 265711 ATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA-AAAGATCCA 265769
Query 10350 GAGAACAGAAGACCCTCCACG 10370
||||| | | |||||| |||
Sbjct 265770 GAGAAGAAGATACCCTCAACG 265790
>seq199
Length=410581
Score = 125 bits (138), Expect = 1e-23
Identities = 142/188 (76%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 68266 TGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGG 68325
|| || | || |||||||| || |||||||| || | ||||| || |||||||| || |
Sbjct 250864 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 250805
Query 68326 CGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGA 68385
|||| || | | || ||||| ||||| || || |||||||| || ||||| |||||
Sbjct 250804 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 250745
Query 68386 CGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
| ||||||||||| ||| || || || || | |||||||| || || |||||||||
Sbjct 250744 CATTGTCGATGGTGTC-GCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTC 250686
Query 68445 TTGACGAA 68452
|| |||||
Sbjct 250685 TTTACGAA 250678
>seq77
Length=597274
Score = 89.7 bits (98), Expect = 9e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 224979 ACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAG 225038
|||||||||||||||| | | |||||| | || || |||| || || || |||||
Sbjct 20876 ACCGCCACTGGATGTATTCGGACGGGGTCTTCTCGAGATGGTGGTCGATGTGCGCGAAAG 20817
Query 225039 CATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC- 225097
| ||||| | ||| || || || ||||| |||| | || ||| ||||
Sbjct 20816 CGTGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGACGTCGCCGGCAGTCG 20757
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157
|| || | ||| || || ||||| |||| ||| |||| |||||| |||||||| || |||
Sbjct 20756 GGATGAG-CTCACCAGTCAGGACGTTGACGAGAGTAGACTTGCCGGCACCATTTGGCCCA 20698
Query 225158 ATCACGCCAATCCGGGAT 225175
|| ||| |||| || |||
Sbjct 20697 ATGACGGCAATACGAGAT 20680
>seq275
Length=1016850
Score = 84.2 bits (92), Expect = 4e-11
Identities = 131/185 (71%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 177098 AATCTCGGCGTTGTTAGTAATACTAGAC-ACAGACGCATCACGGACATTCAGTAGCTTAC 177156
|||||||||||| || | ||| || | | | || ||||| || ||||| || | |||||
Sbjct 575097 AATCTCGGCGTTCTTTGAAAT-CTGGTCGATGGAAGCATCGCGCACATTGAGAATCTTAC 575155
Query 177157 CACGGAGGGGGAAAATTCCGTAGCGATCCCGACCCACGACAGCAAGGCCAGCTGTGGCAA 177216
| || || ||||| | || | | || | || ||||| | || || ||||
Sbjct 575156 CCCGAAGTGGGAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCAAGAGCAA 575215
Query 177217 GCGTGGCGGCAGAGTCACCCTCTGTCAAAATGAGCGTGCACATTCCAGAGTGCTTCGTGC 177276
|| ||||||||||||||| |||||||| |||||||||||| | | || |||||| |
Sbjct 575216 GCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGCGTGCACTTGTGACCGTCCTTCGTAC 575275
Query 177277 CCGCC 177281
| |||
Sbjct 575276 CGGCC 575280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921618989997120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |