Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07- 28] 296 sequences; 30,157,647 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq253 206 5e-48 seq177 141 2e-28 seq199 125 1e-23 seq77 89.7 9e-13 seq275 84.2 4e-11 >seq253 Length=1263309 Score = 206 bits (228), Expect = 5e-48 Identities = 182/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || |||| |||||||| || |||||||| || |||||||| ||||| || Sbjct 702930 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 702871 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||||| || || || | |||||| |||||||| ||||| | || ||||| ||||| Sbjct 702870 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 702811 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||||| ||||||| ||||| ||||| | |||||| ||| Sbjct 702810 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 702751 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || ||||| ||||||||||| || ||||| Sbjct 702750 TCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 702704 Score = 156 bits (172), Expect = 8e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || || ||||| |||||||| || ||||| Sbjct 702702 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 702643 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| ||||| Sbjct 702642 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 702583 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 || || |||||||| || ||||| | |||||| ||||||||||| |||| | || || Sbjct 702582 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTC-GCTGGACTCGAC 702524 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||| ||||||||||| |||||||| Sbjct 702523 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 702476 Score = 113 bits (124), Expect = 8e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || ||| ||| || |||||||| || |||||| Sbjct 702474 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 702415 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || | | ||| ||||| |||||| Sbjct 702414 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 702355 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || || ||||| ||| || ||||||||||| | || || || Sbjct 702354 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACC 702295 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||| ||||| || || |||| Sbjct 702294 TCGAGGGTAATGGTCTTGCCGGTGA 702270 >seq177 Length=462105 Score = 141 bits (156), Expect = 2e-28 Identities = 300/441 (68%), Gaps = 10/441 (2%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || |||||||||||||| || || |||||||||||||| |||||| | Sbjct 265355 CATGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 265414 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGC---GCCAAACTGCTTGGGGTA 10051 || |||||| |||||||||||| |||||||| ||| | |||| ||| || Sbjct 265415 CAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTT---GTT 265471 Query 10052 ACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGA 10111 |||||||| | | ||| || || ||||| || ||||| || ||| ||| | | Sbjct 265472 GCCGAGTGCCAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGC 265531 Query 10112 GTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171 |||||| || | | ||| || | ||||| | ||| |||| ||| | | ||| Sbjct 265532 GTTCATCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGAC 265591 Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATA 10231 || || || |||||||| || | | | || | ||||||||| || | ||| | Sbjct 265592 GGCCTCGGTGATGATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAA 265651 Query 10232 CAGGAGCTCTCCAAACTGCTG-GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 ||| || | || | ||| ||| | |||||| || ||| ||||| |||||| || | Sbjct 265652 CAGAAGGCAGGCGAAGT-CTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGA 265710 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGC-GCAGAACGACCCG 10349 | || |||| |||||| || || || ||||||||| || || ||| || || || Sbjct 265711 ATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA-AAAGATCCA 265769 Query 10350 GAGAACAGAAGACCCTCCACG 10370 ||||| | | |||||| ||| Sbjct 265770 GAGAAGAAGATACCCTCAACG 265790 >seq199 Length=410581 Score = 125 bits (138), Expect = 1e-23 Identities = 142/188 (76%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 68266 TGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGG 68325 || || | || |||||||| || |||||||| || | ||||| || |||||||| || | Sbjct 250864 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 250805 Query 68326 CGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGA 68385 |||| || | | || ||||| ||||| || || |||||||| || ||||| ||||| Sbjct 250804 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 250745 Query 68386 CGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 | ||||||||||| ||| || || || || | |||||||| || || ||||||||| Sbjct 250744 CATTGTCGATGGTGTC-GCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTC 250686 Query 68445 TTGACGAA 68452 || ||||| Sbjct 250685 TTTACGAA 250678 >seq77 Length=597274 Score = 89.7 bits (98), Expect = 9e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 224979 ACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAG 225038 |||||||||||||||| | | |||||| | || || |||| || || || ||||| Sbjct 20876 ACCGCCACTGGATGTATTCGGACGGGGTCTTCTCGAGATGGTGGTCGATGTGCGCGAAAG 20817 Query 225039 CATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC- 225097 | ||||| | ||| || || || ||||| |||| | || ||| |||| Sbjct 20816 CGTGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGACGTCGCCGGCAGTCG 20757 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || || | ||| || || ||||| |||| ||| |||| |||||| |||||||| || ||| Sbjct 20756 GGATGAG-CTCACCAGTCAGGACGTTGACGAGAGTAGACTTGCCGGCACCATTTGGCCCA 20698 Query 225158 ATCACGCCAATCCGGGAT 225175 || ||| |||| || ||| Sbjct 20697 ATGACGGCAATACGAGAT 20680 >seq275 Length=1016850 Score = 84.2 bits (92), Expect = 4e-11 Identities = 131/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 177098 AATCTCGGCGTTGTTAGTAATACTAGAC-ACAGACGCATCACGGACATTCAGTAGCTTAC 177156 |||||||||||| || | ||| || | | | || ||||| || ||||| || | ||||| Sbjct 575097 AATCTCGGCGTTCTTTGAAAT-CTGGTCGATGGAAGCATCGCGCACATTGAGAATCTTAC 575155 Query 177157 CACGGAGGGGGAAAATTCCGTAGCGATCCCGACCCACGACAGCAAGGCCAGCTGTGGCAA 177216 | || || ||||| | || | | || | || ||||| | || || |||| Sbjct 575156 CCCGAAGTGGGAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCAAGAGCAA 575215 Query 177217 GCGTGGCGGCAGAGTCACCCTCTGTCAAAATGAGCGTGCACATTCCAGAGTGCTTCGTGC 177276 || ||||||||||||||| |||||||| |||||||||||| | | || |||||| | Sbjct 575216 GCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGCGTGCACTTGTGACCGTCCTTCGTAC 575275 Query 177277 CCGCC 177281 | ||| Sbjct 575276 CGGCC 575280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921618989997120