Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq177 125 7e-24
seq253 96.9 3e-15
>seq177
Length=462105
Score = 125 bits (138), Expect = 7e-24
Identities = 172/238 (72%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 52601 GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660
|||||| ||| ||||| || | ||||| ||||||| || || | ||| || ||
Sbjct 265610 GAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATG 265551
Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCG 52720
| |||| ||||| |||||||| ||||| | ||||| || || || || |||||
Sbjct 265550 CAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCG 265491
Query 52721 TCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTA 52779
|| || || ||||| || | | |||| || |||||| ||| || || || || |
Sbjct 265490 CCTACTGTTGGCACTCGG-CAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTCA 265432
Query 52780 TGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| | ||||||||||| | |||||||||||||| ||||||||||| || ||||||||
Sbjct 265431 TGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 265374
>seq253
Length=1263309
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| || || || |||||||||||| || |||||| |||||||| || || || | |
Sbjct 702669 GATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCA 702610
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || || ||||| ||||| || || ||||| || ||||| ||| || || | |
Sbjct 702609 AAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACA 702550
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | ||||||| | ||||| ||||||| || | || || || || ||||| ||
Sbjct 702549 TTG-TCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTT 702491
Query 138600 TACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 702490 GACGAAGATCTGCAT 702476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260563829120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |