Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07- 28] 296 sequences; 30,157,647 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq228 188 8e-43 seq177 89.7 6e-13 >seq228 Length=310920 Score = 188 bits (208), Expect = 8e-43 Identities = 889/1394 (64%), Gaps = 31/1394 (2%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||||| || || ||||| || ||| |||| ||| || | ||| ||| Sbjct 234153 TAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAG 234212 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 ||||||||||| || || | | ||| ||| || | ||| | | ||| || Sbjct 234213 GCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCC 234272 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATATCAAATTGA 106111 ||||| | ||||||| || || | ||| | ||| ||||||| || | || Sbjct 234273 TTGAGTGCGGCCCAGTCCCAG---AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGG 234329 Query 106112 AGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AG 106169 ||| | || || || ||||| || ||||||| || | ||| | ||||| || Sbjct 234330 AGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC--GAGCTTCTCAG 234387 Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 | | || || ||||| || | || ||||| ||||| ||||| || | ||| | Sbjct 234388 CAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTAA 234447 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 106289 ||||||||| ||| || || |||| |||| | || |||| || |||| Sbjct 234448 GCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGAC 234507 Query 106290 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACG 106348 | | ||||| | |||||| |||| ||| || | || |||||| || ||| || Sbjct 234508 CGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACT 234566 Query 106349 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 106408 || || | || | || ||| ||| || || || || | || |||| || Sbjct 234567 GGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCG 234626 Query 106409 TGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATT 106468 |||||||| | | |||||| |||| | ||| || | || || || | Sbjct 234627 TGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGC 234686 Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 || |||| |||||| ||||| |||||| | | | |||||| | || || || ||| Sbjct 234687 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 234746 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588 || || || ||||| || || || | |||||| || || ||||| |||| || ||| Sbjct 234747 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 234806 Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACA 106648 ||||| || ||| | || || || ||||| ||||| | || |||||| || | ||| | Sbjct 234807 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 234866 Query 106649 TCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGC 106707 | || | || | | ||||| | ||| | | ||| || ||| || | Sbjct 234867 TTCTGAGCACGAACCGTCTCAC-GGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTC 234925 Query 106708 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAG 106766 | ||||| ||||| | || || ||||| || || || || || || | |||| Sbjct 234926 CTTGAACTCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGAG 234984 Query 106767 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 106826 ||| || || || || |||| ||| || || || |||||||| || | | | Sbjct 234985 TCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGA 235044 Query 106827 AGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 106886 | | ||| | ||| | ||||| | || ||||| || | || | ||||| || Sbjct 235045 ACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCA 235104 Query 106887 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------C 106940 ||| || || ||||| |||||||| |||| || | || || | ||||| | Sbjct 235105 TGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC---TGGACGCTTGTTGC 235161 Query 106941 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 107000 || | || | || || || || ||| |||| | || || |||||||| | || ||| | Sbjct 235162 CACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGT 235221 Query 107001 CTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGTG 107058 ||| || ||||| || | ||| | ||| | |||| || | | || | || Sbjct 235222 TGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACATG 235279 Query 107059 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 107118 | |||||||| ||||| ||| ||||| ||||| | | || || | ||||| Sbjct 235280 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGAT 235339 Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 107178 ||| | || ||| ||||| |||| | | |||||| | | ||||| ||| Sbjct 235340 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 235399 Query 107179 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTGT 107237 ||||||||| |||| || ||||| | || || |||| ||| | ||||| | || Sbjct 235400 GGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAGT 235458 Query 107238 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 ||||||||| | | | |||||||||||||| || ||||||| ||||||||||| | Sbjct 235459 TGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGA 235518 Query 107298 ACATGTATTGGGGT 107311 ||| | ||| ||| Sbjct 235519 TCATCTGTTGCGGT 235532 >seq177 Length=462105 Score = 89.7 bits (98), Expect = 6e-13 Identities = 326/503 (65%), Gaps = 22/503 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || ||||| |||||||| |||||||||||||| || | || |||||| ||||| Sbjct 265374 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCATG 265433 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACC--CCAACTTGTTTGAG 117098 ||||| || || || | ||||| | | | | || | ||||| || Sbjct 265434 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAAC-------AG 265486 Query 117099 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 117158 || ||||| | || | |||||||| | ||||| ||| |||||| || | || Sbjct 265487 TAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAG 265546 Query 117159 ATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 117218 || ||||| || ||||| | |||| | | ||| ||| || ||||| | | ||| Sbjct 265547 CTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGAT 265606 Query 117219 GGCGTGGATAGTTTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276 | || | | | ||| | || | || || | | ||| || ||| Sbjct 265607 GCTCTGCACAAGGGCCTGGT--TCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCG 265664 Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336 || || ||| | |||||||| ||||| || || || || ||||| || || | | Sbjct 265665 AAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCC 265724 Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACC 117395 |||||||| || ||||||| ||| | ||||| ||| || || || |||||||||||||| Sbjct 265725 ATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAA-GATCCAGAGAAGAAGATACC 265783 Query 117396 CTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA-CC 117454 ||| || ||||| |||| || || |||||| | |||| |||| ||| || Sbjct 265784 CTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCC 265842 Query 117455 ATTTCATTGCCCATTTCGCCTTC 117477 || || ||||| | |||||| Sbjct 265843 ATCGCAACGCCCAGTCAGCCTTC 265865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978617071040