Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq228 241 2e-58
seq177 221 2e-52
>seq228
Length=310920
Score = 241 bits (266), Expect = 2e-58
Identities = 975/1517 (64%), Gaps = 47/1517 (3%)
Strand=Plus/Plus
Query 212687 CAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTC 212746
|| ||| | ||||| | |||| |||||| || || | | | |||||| ||||| |
Sbjct 233891 CATATGGATGTTCAAGCTCTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTG 233950
Query 212747 TATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGG 212806
| ||| | | |||| || |||||| ||||||||| ||| | | |||||||| |||||
Sbjct 233951 CACGATGTTACGCTGGCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGG 234010
Query 212807 GAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------C 212858
| | ||||||| ||| | || || || |||||| || | ||| |
Sbjct 234011 AATGTTGGGGATGCGCTGAATGGAGCC-------ATTGTCAGCGATG-ATGCGGTTCTTC 234062
Query 212859 ATGTCCTCGTTCCAGAGGCCCCTGGTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTAT 212917
|||| ||| ||||||||| | |||| | || ||| | || |||||||| |
Sbjct 234063 ATGTTCTCTGACCAGAGGCCAC-GGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGAC 234121
Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977
|||||| || || | | ||| | | ||||| ||| ||||| ||||||| ||
Sbjct 234122 CTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCA 234181
Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037
|||||| |||| ||||| | || |||||| ||||| || || || || ||
Sbjct 234182 CTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGA 234241
Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGA 213097
||| | ||| ||||||| | |||| || | || | ||||||||||| | | |
Sbjct 234242 GTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT 234301
Query 213098 CAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCT 213157
||| ||| | | | |||||||| |||| | ||| | || ||
Sbjct 234302 -AGGA----GTCTTGCCC----CACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGA 234352
Query 213158 GCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGC 213217
||| |||| | ||| || || ||| || || |||||||| || |||| || ||
Sbjct 234353 GCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGC 234412
Query 213218 AGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAA 213277
||| | |||||||| ||||| |||| | || |||| ||||||||| || || |||
Sbjct 234413 AGCATGATAGATGGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGAGTCGAA 234472
Query 213278 GGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCT 213337
||||| | ||| ||||||| || || | ||| || | || |||||||
Sbjct 234473 TGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCG 234532
Query 213338 GTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCT 213396
||| | | ||| ||| | || ||| | ||||| ||||| |||||| |||
Sbjct 234533 GTGGCGGAAGTTGCTCTTTCGTGC-CTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCT 234591
Query 213397 TGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGT 213456
|||| ||||| || ||| ||||||||||||| | | || | || | | || || |
Sbjct 234592 TGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCT 234651
Query 213457 AGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCT 213516
| | || | || | ||||| || | ||||| ||||| || || ||||
Sbjct 234652 CGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCT 234711
Query 213517 C--CTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCC 213574
| ||| ||| | | ||||||||||||||| ||||||| || || |||||||||
Sbjct 234712 CATCTG-GAG-CAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCC 234769
Query 213575 CAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCC 213634
|| |||| || || ||| |||||| | |||||||| || ||| | || | ||
Sbjct 234770 AAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCC 234829
Query 213635 GGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCT 213694
|||||| ||| | | | || || ||| | | | || || | ||| ||
Sbjct 234830 GGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGAGC----ACGAACCGTCT 234885
Query 213695 GACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGA 213753
|| || | | | | | ||| || | ||||| ||||| ||||| |||| || | |
Sbjct 234886 CACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAA 234945
Query 213754 CCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGA 213813
| ||| || || || ||| ||||| || |||| |||| | | ||
Sbjct 234946 CATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGA 235005
Query 213814 CTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCT 213873
| | |||||| || || || || | ||| || ||| ||||| || | | | |
Sbjct 235006 CACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTT 235065
Query 213874 CGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCT 213933
| ||| |||| ||| ||||| || || | || | | || ||| || ||||||||||
Sbjct 235066 CTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCT 235125
Query 213934 CCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCA 213990
| | |||||||||||| || || || | |||| || |||||||| || | ||
Sbjct 235126 CAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAG 235185
Query 213991 CCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCT 214049
|||| ||| || || | ||||| || |||||||| ||| ||||| || || |
Sbjct 235186 TGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGA-TGTGCCGTTTGTGCCGCCA 235244
Query 214050 ATATACGAGCCGGAGGCCCTCAGGTTGCT--CATGGAGAGCCCTATGCCACCGGCGTACT 214107
|| || ||||| | |||||| | |||| |||| ||| || || || || |||| ||
Sbjct 235245 ATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGA--CCAATACCGCCAGCGTTCT 235302
Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167
||||||||||||| || | | | || || ||| || | ||||||||||| | |
Sbjct 235303 TGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCA 235362
Query 214168 GGTTCAGCAAGAAGCAG 214184
| || ||||||||||
Sbjct 235363 TGGCCACCAAGAAGCAG 235379
>seq177
Length=462105
Score = 221 bits (244), Expect = 2e-52
Identities = 565/854 (66%), Gaps = 16/854 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | ||||| |||||||| ||||| || ||| ||| ||||||||
Sbjct 265370 CTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTC 265429
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||||||||||| | ||| || | | | ||| ||| | || ||| |
Sbjct 265430 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTT--GCCGA---GTGCCAAC 265484
Query 47957 AG---GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013
|| | |||| |||||| | || ||||||| |||||||||| |||||| || |
Sbjct 265485 AGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGA 265544
Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073
|| || | ||| | ||| | ||||||| ||| ||| ||||| || |
Sbjct 265545 AGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATG 265604
Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133
|| || || ||| || || ||||| ||| ||| | | || | ||||
Sbjct 265605 ATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA---ACAGAAGGCAG 265661
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|| ||||| |||||| ||| || || ||| ||||||| |||| ||||| ||| ||
Sbjct 265662 GCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCG 265721
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
| ||||| || | | || |||||||| || || || ||||| ||||||||||||||
Sbjct 265722 GCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATA 265781
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313
||||| || || || || || |||| | |||| | | ||||||||| || |||
Sbjct 265782 CCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATC 265841
Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373
|| | ||||||||| |||||| | ||||||||| || | || ||||| |||
Sbjct 265842 CATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAAC 265901
Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433
|| | | | || || || | || ||| || || | || ||||
Sbjct 265902 AGGTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCG 265961
Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493
||||| | ||||| || ||||||||| ||||||||| | ||||| | ||||
Sbjct 265962 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 266021
Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553
|| || | | ||| | ||| | || ||||| ||||| || ||||| || || || |||
Sbjct 266022 ACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAG 266081
Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-AGC--ATTCCAGCCC 48610
|| || ||||| ||| | ||| || |||| || | |||| || |||||| |
Sbjct 266082 AATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCG 266141
Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670
|| | || || ||| || | || || | |||||||| || || || ||||||
Sbjct 266142 TGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTG 266201
Query 48671 TACATGCCCCATAT 48684
||||| ||||||
Sbjct 266202 TACATTTGCCATAT 266215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931529353328640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |