Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07- 28] 296 sequences; 30,157,647 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq228 242 4e-59 seq253 147 2e-30 seq199 93.3 4e-14 >seq228 Length=310920 Score = 242 bits (268), Expect = 4e-59 Identities = 1105/1729 (64%), Gaps = 35/1729 (2%) Strand=Plus/Plus Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GTCGCTTTATCTTCATCT 148119 |||||| || || || ||||||||||| ||||| | | || || | | || |||| Sbjct 233915 CTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTTACGCTGGCTG-ATCT 233973 Query 148120 CCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCG 148179 ||||| | |||||||| || ||||| | || |||||| | ||||||||| | | Sbjct 233974 CCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCGCTGAATGG 234033 Query 148180 AGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCA 148239 |||| || || | || | || ||| | || | | ||| | |||| | Sbjct 234034 AGCCATTGTCAGCGATGATGCGGTTCTTCATGTTCTCTGACCAGAGGCCACGGTCGACGA 234093 Query 148240 GGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA- 148298 | || | | || | | || || ||||| |||||||| || | ||| || || ||| Sbjct 234094 GATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTCGCCAGCCAACACACGACG-AGAG 234152 Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358 || | |||||| || | || || || ||||||| ||||| ||||||| ||||| Sbjct 234153 TAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAG 234212 Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418 || || ||||| ||| || || ||||||||||||| |||| | | || |||| | Sbjct 234213 GCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCC 234272 Query 148419 TTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGA 148478 || || || |||||||||||||| | || ||| | ||||||||||||||| || Sbjct 234273 TTGAGTGCGGCCCAGTCCCAGAGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGC 234332 Query 148479 ATGCCGCGGCTA-GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAG 148537 ||| | || | | || ||| ||| | ||| || ||| || | | || || Sbjct 234333 TCGCC-CTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAG 234391 Query 148538 TTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAG 148597 ||||| ||||| || || | | || || ||||| ||| || | || ||| Sbjct 234392 CTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTAAGCTC 234451 Query 148598 C---GCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCC 148654 | ||| | | | | ||| | ||||| || || || || || || ||||| || Sbjct 234452 CTTGGCCTCAGGCGAG---TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACC 234508 Query 148655 CTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCG 148713 | || || | |||||||| ||||| | |||| || || |||| | | | Sbjct 234509 GTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGC-CTCTGGTACTG 234567 Query 148714 GATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGC 148773 | |||| |||| |||||| |||||| || || || ||||| || || | | Sbjct 234568 GGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGT 234627 Query 148774 GCAG------CAATTCAAAATCGTACTTGTC-ATCTACGATGCATCGGTTCACGGCGATA 148826 | || || |||||| | | || || || | ||| | | | || || | Sbjct 234628 GAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGT-CGACGTAGGTGGGCAGAGCAAGC 234686 Query 148827 GAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCAC 148886 || || |||||||| || || |||||| || || |||||| | |||||| | |||| Sbjct 234687 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 234746 Query 148887 AGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCC 148946 | ||| || ||||| ||| | ||||| ||||||||||||| |||| |||||| Sbjct 234747 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 234806 Query 148947 TTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTC--CACTATGAACCGATGCA 149004 |||||||| ||| | ||| ||| || || ||||| || | || | | || | Sbjct 234807 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCAT--A 234864 Query 149005 GGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAG--TATACAG 149062 | ||| || || || || | || | ||| || ||| |||| | ||||| Sbjct 234865 TTTTCTGAGCACGAACCGTCT-CACGGCCCTTGCCTTCT-CTCTCATAACGCTCGTACAG 234922 Query 149063 CCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAG 149122 | || |||| | || ||||| ||| ||||| ||||| | || |||||||| || Sbjct 234923 CTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAG 234982 Query 149123 CGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTA 149182 | ||| ||||| | | || |||| |||||| |||||||| | |||||| ||||| Sbjct 234983 AGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTA 235042 Query 149183 CATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCT 149242 | | |||||||| ||||| || ||| ||| |||| | | || Sbjct 235043 GAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGA-ACT 235101 Query 149243 GAAT-ATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGC 149298 | || | ||| || ||||||||||||| ||| | || | || || ||| |||| Sbjct 235102 GCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGC 235161 Query 149299 CGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC 149358 | |||||||| |||| || | |||||||| | ||||| | ||| ||| ||| || Sbjct 235162 CACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGT 235221 Query 149359 TGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGA 149418 ||| |||||||| || || |||| ||| || | | ||||| || | | Sbjct 235222 TGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAA 235281 Query 149419 CGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGC 149478 || || ||||| ||| ||| ||||| || || ||| || |||||| | Sbjct 235282 GACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATAC 235341 Query 149479 CCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCG 149538 | || |||||||| |||||||| || || ||||| || | |||| | | Sbjct 235342 CATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGG 235401 Query 149539 TGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGT 149598 | || || ||| | || || || ||||| || || ||| ||| | || Sbjct 235402 TACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAGTTGT 235461 Query 149599 ACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCA 149658 | | ||| | | | || ||||| || ||||| ||||| | || || ||||| | || Sbjct 235462 ATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCA 235521 Query 149659 TATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTG 149718 | || ||||||| ||| || || ||| ||||| |||| | ||| || || | Sbjct 235522 TCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGATCGCTCCAGAG 235581 Query 149719 TCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 ||||| |||| ||||||| ||||| ||||||||| | | | ||||||| Sbjct 235582 TCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGC 235630 >seq253 Length=1263309 Score = 147 bits (162), Expect = 2e-30 Identities = 153/199 (77%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || |||||||| | | ||| || |||||| |||||||||| Sbjct 702900 GTGGACTCCTTCTGGATGTTGTAATC--CGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGC 702843 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| ||||||||||| || |||||||| |||||||| ||||||| || Sbjct 702842 CGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACT 702783 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||||| | ||||| |||| |||| ||| |||||||| || | Sbjct 702782 TGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTG 702723 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||| ||||| Sbjct 702722 TCTTGACGAAAATTTGCAT 702704 Score = 143 bits (158), Expect = 3e-29 Identities = 152/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || ||||| ||| || || ||| | ||||||||||||||||| Sbjct 702672 GTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCA-TCCTCGAGCTGCTTGCC 702614 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || ||||||||||| || ||||| || |||||||| |||||| ||| Sbjct 702613 TGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTT 702554 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| ||| ||| || |||| ||||| ||| |||||||| ||||| Sbjct 702553 GACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGT 702494 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 702493 CTTGACGAAGATCTGCAT 702476 Score = 95.1 bits (104), Expect = 1e-14 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| ||| | ||| ||| |||||||||||||||||| ||| Sbjct 702439 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACC-GTCCTCGAGCTGCTTGCCTGCGA 702381 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| | || |||||||| || || ||||||||||| || |||||| ||| | | Sbjct 702380 AAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGGATCTTGCTCTTCACAT 702321 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | ||||||| | ||| || |||| ||| | ||| |||||||| Sbjct 702320 TGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTGCCGGT 702272 >seq199 Length=410581 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133465 TGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCC 133523 || || | ||||| || ||||| ||| | ||| ||| | ||||| | |||||| || Sbjct 250864 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCA-TCCTCCAACTGCTTTCCA 250806 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | ||||||||||| || ||||| || |||||||| |||||| |||| Sbjct 250805 GCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTG 250746 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||| | | ||| || |||| |||| ||| ||||| || || || Sbjct 250745 ACATTGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTC 250686 Query 133644 TTTACGAA 133651 |||||||| Sbjct 250685 TTTACGAA 250678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419011343040