Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq228 242 4e-59
seq253 147 2e-30
seq199 93.3 4e-14
>seq228
Length=310920
Score = 242 bits (268), Expect = 4e-59
Identities = 1105/1729 (64%), Gaps = 35/1729 (2%)
Strand=Plus/Plus
Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GTCGCTTTATCTTCATCT 148119
|||||| || || || ||||||||||| ||||| | | || || | | || ||||
Sbjct 233915 CTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTTACGCTGGCTG-ATCT 233973
Query 148120 CCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCG 148179
||||| | |||||||| || ||||| | || |||||| | ||||||||| | |
Sbjct 233974 CCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCGCTGAATGG 234033
Query 148180 AGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCA 148239
|||| || || | || | || ||| | || | | ||| | |||| |
Sbjct 234034 AGCCATTGTCAGCGATGATGCGGTTCTTCATGTTCTCTGACCAGAGGCCACGGTCGACGA 234093
Query 148240 GGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA- 148298
| || | | || | | || || ||||| |||||||| || | ||| || || |||
Sbjct 234094 GATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTCGCCAGCCAACACACGACG-AGAG 234152
Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358
|| | |||||| || | || || || ||||||| ||||| ||||||| |||||
Sbjct 234153 TAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAG 234212
Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418
|| || ||||| ||| || || ||||||||||||| |||| | | || |||| |
Sbjct 234213 GCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCC 234272
Query 148419 TTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGA 148478
|| || || |||||||||||||| | || ||| | ||||||||||||||| ||
Sbjct 234273 TTGAGTGCGGCCCAGTCCCAGAGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGC 234332
Query 148479 ATGCCGCGGCTA-GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAG 148537
||| | || | | || ||| ||| | ||| || ||| || | | || ||
Sbjct 234333 TCGCC-CTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAG 234391
Query 148538 TTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAG 148597
||||| ||||| || || | | || || ||||| ||| || | || |||
Sbjct 234392 CTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTAAGCTC 234451
Query 148598 C---GCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCC 148654
| ||| | | | | ||| | ||||| || || || || || || ||||| ||
Sbjct 234452 CTTGGCCTCAGGCGAG---TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACC 234508
Query 148655 CTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCG 148713
| || || | |||||||| ||||| | |||| || || |||| | | |
Sbjct 234509 GTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGC-CTCTGGTACTG 234567
Query 148714 GATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGC 148773
| |||| |||| |||||| |||||| || || || ||||| || || | |
Sbjct 234568 GGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGT 234627
Query 148774 GCAG------CAATTCAAAATCGTACTTGTC-ATCTACGATGCATCGGTTCACGGCGATA 148826
| || || |||||| | | || || || | ||| | | | || || |
Sbjct 234628 GAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGT-CGACGTAGGTGGGCAGAGCAAGC 234686
Query 148827 GAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCAC 148886
|| || |||||||| || || |||||| || || |||||| | |||||| | ||||
Sbjct 234687 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 234746
Query 148887 AGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCC 148946
| ||| || ||||| ||| | ||||| ||||||||||||| |||| ||||||
Sbjct 234747 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 234806
Query 148947 TTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTC--CACTATGAACCGATGCA 149004
|||||||| ||| | ||| ||| || || ||||| || | || | | || |
Sbjct 234807 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCAT--A 234864
Query 149005 GGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAG--TATACAG 149062
| ||| || || || || | || | ||| || ||| |||| | |||||
Sbjct 234865 TTTTCTGAGCACGAACCGTCT-CACGGCCCTTGCCTTCT-CTCTCATAACGCTCGTACAG 234922
Query 149063 CCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAG 149122
| || |||| | || ||||| ||| ||||| ||||| | || |||||||| ||
Sbjct 234923 CTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAG 234982
Query 149123 CGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTA 149182
| ||| ||||| | | || |||| |||||| |||||||| | |||||| |||||
Sbjct 234983 AGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTA 235042
Query 149183 CATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCT 149242
| | |||||||| ||||| || ||| ||| |||| | | ||
Sbjct 235043 GAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGA-ACT 235101
Query 149243 GAAT-ATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGC 149298
| || | ||| || ||||||||||||| ||| | || | || || ||| ||||
Sbjct 235102 GCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGC 235161
Query 149299 CGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC 149358
| |||||||| |||| || | |||||||| | ||||| | ||| ||| ||| ||
Sbjct 235162 CACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGT 235221
Query 149359 TGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGA 149418
||| |||||||| || || |||| ||| || | | ||||| || | |
Sbjct 235222 TGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAA 235281
Query 149419 CGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGC 149478
|| || ||||| ||| ||| ||||| || || ||| || |||||| |
Sbjct 235282 GACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATAC 235341
Query 149479 CCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCG 149538
| || |||||||| |||||||| || || ||||| || | |||| | |
Sbjct 235342 CATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGG 235401
Query 149539 TGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGT 149598
| || || ||| | || || || ||||| || || ||| ||| | ||
Sbjct 235402 TACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAGTTGT 235461
Query 149599 ACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCA 149658
| | ||| | | | || ||||| || ||||| ||||| | || || ||||| | ||
Sbjct 235462 ATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCA 235521
Query 149659 TATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTG 149718
| || ||||||| ||| || || ||| ||||| |||| | ||| || || |
Sbjct 235522 TCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGATCGCTCCAGAG 235581
Query 149719 TCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767
||||| |||| ||||||| ||||| ||||||||| | | | |||||||
Sbjct 235582 TCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGC 235630
>seq253
Length=1263309
Score = 147 bits (162), Expect = 2e-30
Identities = 153/199 (77%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
|||||||| ||||| || |||||||| | | ||| || |||||| ||||||||||
Sbjct 702900 GTGGACTCCTTCTGGATGTTGTAATC--CGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGC 702843
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||| ||||||||||| || |||||||| |||||||| ||||||| ||
Sbjct 702842 CGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACT 702783
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | |||||||| | ||||| |||| |||| ||| |||||||| || |
Sbjct 702782 TGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTG 702723
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || |||||||| |||||
Sbjct 702722 TCTTGACGAAAATTTGCAT 702704
Score = 143 bits (158), Expect = 3e-29
Identities = 152/198 (77%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || |||||||| || ||||| ||| || || ||| | |||||||||||||||||
Sbjct 702672 GTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCA-TCCTCGAGCTGCTTGCC 702614
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| |||| || ||||||||||| || ||||| || |||||||| |||||| |||
Sbjct 702613 TGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTT 702554
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | |||||| ||| ||| || |||| ||||| ||| |||||||| |||||
Sbjct 702553 GACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGT 702494
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 702493 CTTGACGAAGATCTGCAT 702476
Score = 95.1 bits (104), Expect = 1e-14
Identities = 124/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527
||| ||||| || ||||| ||| | ||| ||| |||||||||||||||||| |||
Sbjct 702439 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACC-GTCCTCGAGCTGCTTGCCTGCGA 702381
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587
|||| | || |||||||| || || ||||||||||| || |||||| ||| | |
Sbjct 702380 AAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGGATCTTGCTCTTCACAT 702321
Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|| | ||||||| | ||| || |||| ||| | ||| ||||||||
Sbjct 702320 TGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTGCCGGT 702272
>seq199
Length=410581
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/188 (72%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 133465 TGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCC 133523
|| || | ||||| || ||||| ||| | ||| ||| | ||||| | |||||| ||
Sbjct 250864 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCA-TCCTCCAACTGCTTTCCA 250806
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | || | ||||||||||| || ||||| || |||||||| |||||| ||||
Sbjct 250805 GCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTG 250746
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | |||||| | | ||| || |||| |||| ||| ||||| || || ||
Sbjct 250745 ACATTGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTC 250686
Query 133644 TTTACGAA 133651
||||||||
Sbjct 250685 TTTACGAA 250678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483419011343040
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