Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07- 28] 296 sequences; 30,157,647 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq177 174 2e-37 seq228 95.1 2e-13 >seq177 Length=462105 Score = 174 bits (192), Expect = 2e-37 Identities = 357/515 (69%), Gaps = 28/515 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || | Sbjct 266216 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 266158 Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888 | | || | | ||||| ||| || | | ||||||||| || |||| Sbjct 266157 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 266101 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || ||||||||||| || || |||||| ||||||||| || ||||||||| | | Sbjct 266100 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 266042 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | ||||| | ||||| || | || |||||||| | || ||||| ||||||||| Sbjct 266041 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 265982 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||||||||| || || || || || || ||||| || ||| ||| || Sbjct 265981 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 265922 Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 || || || || | |||| || |||||||||| | || | | | | Sbjct 265921 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 265865 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 ||||| ||||||||| || ||||| ||||| | ||||||| || ||| | Sbjct 265864 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 265810 Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240 | ||| | | ||||||| ||| ||||| ||||| ||||| || | || ||| || ||| Sbjct 265809 GTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 265751 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || ||||| ||||| || || |||||| |||| || Sbjct 265750 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 265716 Score = 131 bits (144), Expect = 2e-24 Identities = 317/480 (66%), Gaps = 0/480 (0%) Strand=Plus/Plus Query 332856 CGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCA 332915 |||| ||||| ||| || |||| | ||| || || || || || | |||||||| Sbjct 61076 CGTCGGTGAGTCGCGCATAGCGTAAGATTGCGCAGCGCGATTGAAGAGGCTCGATGATTT 61135 Query 332916 TTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCG 332975 | ||| |||||| || | ||| || || ||||| || | | ||||||| || Sbjct 61136 TGTTCGATTGGTTGCAAGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTTCCATCGTTC 61195 Query 332976 ACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCT 333035 || || ||||| || || | | || | || || || || || || || | |||| Sbjct 61196 GGCGCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCATCTAGAATTACAATCT 61255 Query 333036 TGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCA 333095 | || |||||| || || ||| ||||| ||| | ||||| || || | Sbjct 61256 TCTGCCGCCCGGCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATTCGGTTTCGTA 61315 Query 333096 CGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCG 333155 ||||||| | ||||||||||| || |||||||||||||| ||||| || | | ||| | Sbjct 61316 CGACGTCGATTCCGCGCTCGTCGGAGGCGTTGAGTTCGAGGACGGCTTCTTTGTAGGCTG 61375 Query 333156 CACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGAC 333215 | || ||||| |||||| ||||| || ||||| ||||| | |||||| | Sbjct 61376 CGCCTAAGAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATTCCGGGCATGC 61435 Query 333216 CCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGG 333275 | | | | | || |||||||||||||| ||| | |||||| | | || Sbjct 61436 CGGAGATGATTACGTGTGGCATGTTGCCGTCTTTGGCGATGATTTTGAGGCGTTCGATGG 61495 Query 333276 CGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGATCCATGGGA 333335 | ||||||||| ||||||||||| | | |||||||||||||| | || |||| Sbjct 61496 TTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCAACCCTAGGGA 61555 Score = 100 bits (110), Expect = 4e-15 Identities = 177/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| |||||||||| ||||||| | ||||| | | || | || || | Sbjct 265606 ATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAG 265547 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | || |||||||| | ||||||| || ||||||||||| |||||||| |||| Sbjct 265546 CTTCTGGGGATGAACGCTGGC-CTCATGTCACAATACATTGAATTC-GTCGCCGATCGCC 265489 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || ||| |||||| | ||||| |||| | ||||||| ||| | ||| Sbjct 265488 TACTGTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 265430 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| || ||||| | |||||||||||||| |||||| || | |||||||||| Sbjct 265429 GAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAG 265370 Query 1456762 AAGGCCGGCGTCA 1456774 ||||| || |||| Sbjct 265369 AAGGCTGGTGTCA 265357 >seq228 Length=310920 Score = 95.1 bits (104), Expect = 2e-13 Identities = 138/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930 || || ||||||||||| |||||| || | | ||| | |||| || ||||||||| Sbjct 234299 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 234241 Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990 || | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | |||| Sbjct 234240 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 234181 Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 ||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| || Sbjct 234180 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 234122 Query 263050 GTGGTCAACC 263059 || ||||||| Sbjct 234121 GTCGTCAACC 234112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177782650255952