Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07- 28] 296 sequences; 30,157,647 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq228 215 6e-51 seq177 123 3e-23 >seq228 Length=310920 Score = 215 bits (238), Expect = 6e-51 Identities = 1112/1748 (64%), Gaps = 47/1748 (3%) Strand=Plus/Plus Query 117836 TCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGA 117895 ||||||||||||||| || |||||||| || ||||||| || | ||||| || Sbjct 233807 TCGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAACCAGCGAAGTGCATGCTGGT 233866 Query 117896 CAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955 | |||| | |||||| | ||| || ||||| || || || || ||||| || Sbjct 233867 AATCTTGCCCATGGTTGGCTCCTTCATATGGATGTTCAAGCTCTGAGACTGGTCGATAAA 233926 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCT---TGATTTCCCACACAGT 118012 || || || || ||||| | ||| || || |||| ||||| || || Sbjct 233927 AGCACCACGGTCAGCAGCCATCTG---CACGATGTTACGCTGGCTGATCTCCCAGACGGT 233983 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072 | ||||||| ||| | || ||||| || | ||| || ||||| ||| | Sbjct 233984 CTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCGCTGAATGGAGCCATTGTC 234043 Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132 || ||| | | |||||| | || ||||||||| ||| | |||||||| || Sbjct 234044 AGCGATGATGCGGTTCTTCATGTTCTCTGACCAGAGGCCACGGTCGACGAGATCCTTCAG 234103 Query 118133 GAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATT 118189 || ||| | |||| || ||||| || || | || | ||| || || || Sbjct 234104 AAGCCATGGGT--TGACGACCTGGAACTCGCCAGCCAACACACGACG-AGAGTAAATGTT 234160 Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249 | | ||||||||||| |||||||| || |||| ||| || | || |||||||| || Sbjct 234161 GCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGG 234220 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTT---CCCTAATGCGTTCCTTGAG 118306 ||| || || | |||||| ||| || | ||| | | | | ||| ||||||| Sbjct 234221 CATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC---CCTTGAG 234277 Query 118307 AGCGTCCCAGTCGTAGTTGAGCTTTG---TCTCCCCCTGCCACATATCAAACTGGAGGAT 118363 ||| ||||||| || | | | ||| ||| ||||| || ||||||| Sbjct 234278 TGCGGCCCAGTCCCAGAGGTCGGTAGGAGTCTTGCCC---CACATGTCGTACTGGAGCTC 234334 Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423 || || || |||| || || ||||||| || || || ||| || | || Sbjct 234335 GCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTC 234394 Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 | | ||||| || || || ||||| || || |||||||| | ||| | |||| Sbjct 234395 GCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTAAGCTCCTT 234454 Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543 |||||| || || || | | ||| | || |||| || ||||| | ||| Sbjct 234455 GGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGAC 234514 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAA 118602 ||| || ||||| || || || | | || ||| || || ||| || || || Sbjct 234515 ACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACTGGGTAGT 234573 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 | || | ||||| | | || || || ||||| || || |||| || ||||| | Sbjct 234574 AGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTT 234633 Query 118663 TTTCGTAATCAAAA-CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721 | | | | |||||| | || |||| | ||| || | || || || | || ||| Sbjct 234634 TCTTGAAGTCAAAAACCTCGT-TCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCC 234692 Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781 ||||| || |||| | |||||| | ||| |||||| || || || |||||||| || Sbjct 234693 AGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTA 234752 Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841 || ||||| |||||||| | ||||| ||||| ||| ||| || |||||||| Sbjct 234753 GAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTAC 234812 Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCA 118901 || ||| | || || || ||||| || || | || ||||||||| | ||| | | | Sbjct 234813 AGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGA 234872 Query 118902 GCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAAC 118961 || | || || | | | || ||| ||| || ||| || | | ||| Sbjct 234873 GCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAAC 234932 Query 118962 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACCATTG 119020 || ||||| | || || || || || || || |||| || | |||| ||| Sbjct 234933 TCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGAGTCCAAGT 234991 Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 119080 || || || || |||| ||| ||||| || || |||||||| || |||| | ||| Sbjct 234992 GCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATC 235051 Query 119081 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 119140 || ||| ||||||| | || || || || | |||| || | ||||| || Sbjct 235052 GCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTC 235111 Query 119141 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA------CCAGCCTG 119194 || |||||||| || ||||| | || | | | ||| |||| ||| |||| Sbjct 235112 TGCATGCCACGGCTCAAGGTAGATGGCAAAAG-CACCTG--GACGCTTGTTGCCACCCTG 235168 Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254 || || || | |||||| |||| | || || |||||||| | | ||| | |||| Sbjct 235169 GTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGT 235228 Query 119255 GCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCA 119312 ||| ||||| || | ||| | ||| || |||| |||| | ||| | || | |||| Sbjct 235229 GCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACATGAAGACCA 235286 Query 119313 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 119372 ||||| || || ||| ||||| || || | |||| | ||||||| ||||| Sbjct 235287 ATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCA 235346 Query 119373 ATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACC 119431 || |||| |||| | || | | ||||||| | | || | |||| || ||||| Sbjct 235347 ATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCG-CCTGTGGGGTACC 235405 Query 119432 AGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGG-GACATCTTGTCGTAGG 119490 ||| |||| || ||||| | || || |||| ||| | ||||| | || ||| | Sbjct 235406 AGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAGTTGTATG 235464 Query 119491 TCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 119550 |||| | | || |||||||||||| ||||| |||| | || ||||| | ||| | Sbjct 235465 TCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCT 235524 Query 119551 ATTGGGGT 119558 ||| ||| Sbjct 235525 GTTGCGGT 235532 >seq177 Length=462105 Score = 123 bits (136), Expect = 3e-23 Identities = 528/819 (64%), Gaps = 29/819 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| ||||||||||||||||| ||||| ||| ||| || |||||||| Sbjct 265374 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCATG 265433 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | | ||| || | | | | | | || Sbjct 265434 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT------ 265487 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || ||||| | |||| | |||||||| | ||||| | | |||||| || | || Sbjct 265488 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 265547 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || ||||| || ||||| | |||| ||| ||| || || || || | |||| Sbjct 265548 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG 265607 Query 129962 GCGTG---AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 130018 || || || || || | || | || || | | ||| || ||| Sbjct 265608 CTCTGCACAAGGGCCTG-GTTC--GGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCG 265664 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || ||| | ||||| |||||||||||||| || |||||||| || || | | Sbjct 265665 AAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCC 265724 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 |||||||| || ||||||| |||||| || ||| ||| || |||||||||||||| ||| Sbjct 265725 ATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCC 265784 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCA 130197 || || || || |||| |||||| || || | || | |||| | || ||| Sbjct 265785 TCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCA 265843 Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGA 130256 || |||||| | ||||| | ||| || |||| | | | ||| || || || Sbjct 265844 TCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAG 265903 Query 130257 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 130316 || ||| | || ||| || ||||||| |||| ||||| |||||||| ||| Sbjct 265904 GTATGTTCGCTGCT-TTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGG 265962 Query 130317 CATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 130375 |||| | | ||| || | ||| | ||||||| | || || || ||||| Sbjct 265963 AGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 266021 Query 130376 ACCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 130434 |||||| || || | | || ||||| ||||| |||||||| | || || Sbjct 266022 ACCTCA-GAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAA 266080 Query 130435 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 130491 || || |||| | ||||| |||| | ||||| | | | |||||||| Sbjct 266081 GAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTC 266140 Query 130492 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 || ||||||||||| ||||| | |||||| || ||||| Sbjct 266141 GTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 266179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432911789760