Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq228 297 2e-75
seq177 111 2e-19
seq275 93.3 5e-14
>seq228
Length=310920
Score = 297 bits (328), Expect = 2e-75
Identities = 913/1389 (66%), Gaps = 41/1389 (3%)
Strand=Plus/Minus
Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290
||| ||||||| ||||| |||| |||||||||||||||||||| | | | ||||||
Sbjct 235522 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 235463
Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349
||| || | ||||| | ||| |||| || || | ||||| || |||| ||||||
Sbjct 235462 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 235404
Query 104350 TACACCA-AGACCC--CAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 104406
||| ||| || | | | | ||| |||||| | | |||| ||||| ||| ||
Sbjct 235403 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 235347
Query 104407 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 104466
| |||||||| | || || | | ||||| ||||| ||| ||||| |||||
Sbjct 235346 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 235287
Query 104467 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGT 104524
||| | || | || | | || |||| | ||| || || | || ||||| ||
Sbjct 235286 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 235229
Query 104525 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAT 104584
||| | ||| || | |||||||| || || | |||| ||| || || || || |
Sbjct 235228 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 235169
Query 104585 CAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 104638
|| | ||| ||||| | || || | || |||| |||||||| ||||| ||
Sbjct 235168 CAGGGTGGCAACAAGCGTCCA---GGTGCTTTTGCCATCTACCTTGAGCCGTGGCATGCA 235112
Query 104639 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CG 104697
|| ||||| ||||| | || | || ||||| || | || || | || ||| ||
Sbjct 235111 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 235053
Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757
|||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| ||
Sbjct 235052 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 234993
Query 104758 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816
|| |||| |||| | || || || || || |||||||| || |||| ||||| |
Sbjct 234992 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 234934
Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876
|||| | | || ||| || ||| |||||| || || |||||| | |
Sbjct 234933 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 234874
Query 104877 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGC 104936
|| | | ||| | ||||||||| || | || |||||||| || ||||| | ||| |
Sbjct 234873 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 234814
Query 104937 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 104996
| ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| |
Sbjct 234813 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 234754
Query 104997 CCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 105056
| ||| | || || || ||| |||| | | | ||||||| ||||| || || |
Sbjct 234753 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 234694
Query 105057 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 105116
| || || | ||||| |||| || || || |||| || ||||| | | |
Sbjct 234693 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 234634
Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176
|||| ||||| || || ||| ||||| ||||| |||| || || | || |
Sbjct 234633 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 234574
Query 105177 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235
||||| || ||| || || || || | | ||||| || |||||||| |||
Sbjct 234573 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 234515
Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 105294
|| | ||||| || |||| ||| || | || || | |||| || || || ||
Sbjct 234514 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 234456
Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354
||||| | ||| | || ||||||||||| ||||| || ||||||||||| |||
Sbjct 234455 CAAGGAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGC---TTC 234399
Query 105355 A---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411
| ||| | || ||| ||||| || || || | || ||||||| || ||
Sbjct 234398 ATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCA 234339
Query 105412 AGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGA 105468
|| | ||| || | || ||||||| ||| | ||| | || || |||||||
Sbjct 234338 GGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGC 234282
Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528
|| ||||||| ||| || | ||| | || ||| || ||| | || || ||
Sbjct 234281 CGCACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGAT 234222
Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588
|||||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| |
Sbjct 234221 GCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAG 234162
Query 105589 GAACATCTA 105597
||||| ||
Sbjct 234161 CAACATTTA 234153
>seq177
Length=462105
Score = 111 bits (122), Expect = 2e-19
Identities = 116/150 (77%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 94865
|| ||| | |||||||| ||||||||||||||||||||||| | ||| ||| |||||
Sbjct 265810 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 265752
Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925
| ||||| ||||| || ||||||||| | || ||| ||||| |||||||| |||||
Sbjct 265751 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 265692
Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||| ||||| | ||| ||| || ||
Sbjct 265691 CCGTGATGAGGGCATGCACACAGACTTCGC 265662
>seq275
Length=1016850
Score = 93.3 bits (102), Expect = 5e-14
Identities = 148/206 (72%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228
|||||||||||||| || || |||| ||| ||| ||||||||||| ||| | |||||
Sbjct 574972 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 575031
Query 169229 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 169286
|| |||| | | |||| |||||||| ||||| |||||||| | ||||||||
Sbjct 575032 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 575090
Query 169287 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTA 169345
| || |||| ||| ||| || | ||| || || |||||||| ||||| |
Sbjct 575091 GTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 575148
Query 169346 CACTTCCCACGAAGAGGGAAGACACC 169371
||| || ||||| |||||||||||
Sbjct 575149 ATCTTACCCCGAAGTGGGAAGACACC 575174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583258641935040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |