Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07- 28] 296 sequences; 30,157,647 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq228 297 2e-75 seq177 111 2e-19 seq275 93.3 5e-14 >seq228 Length=310920 Score = 297 bits (328), Expect = 2e-75 Identities = 913/1389 (66%), Gaps = 41/1389 (3%) Strand=Plus/Minus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| ||||| |||| |||||||||||||||||||| | | | |||||| Sbjct 235522 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 235463 Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349 ||| || | ||||| | ||| |||| || || | ||||| || |||| |||||| Sbjct 235462 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 235404 Query 104350 TACACCA-AGACCC--CAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 104406 ||| ||| || | | | | ||| |||||| | | |||| ||||| ||| || Sbjct 235403 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 235347 Query 104407 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 104466 | |||||||| | || || | | ||||| ||||| ||| ||||| ||||| Sbjct 235346 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 235287 Query 104467 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGT 104524 ||| | || | || | | || |||| | ||| || || | || ||||| || Sbjct 235286 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 235229 Query 104525 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAT 104584 ||| | ||| || | |||||||| || || | |||| ||| || || || || | Sbjct 235228 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 235169 Query 104585 CAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 104638 || | ||| ||||| | || || | || |||| |||||||| ||||| || Sbjct 235168 CAGGGTGGCAACAAGCGTCCA---GGTGCTTTTGCCATCTACCTTGAGCCGTGGCATGCA 235112 Query 104639 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CG 104697 || ||||| ||||| | || | || ||||| || | || || | || ||| || Sbjct 235111 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 235053 Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757 |||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| || Sbjct 235052 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 234993 Query 104758 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816 || |||| |||| | || || || || || |||||||| || |||| ||||| | Sbjct 234992 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 234934 Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876 |||| | | || ||| || ||| |||||| || || |||||| | | Sbjct 234933 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 234874 Query 104877 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGC 104936 || | | ||| | ||||||||| || | || |||||||| || ||||| | ||| | Sbjct 234873 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 234814 Query 104937 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 104996 | ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| | Sbjct 234813 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 234754 Query 104997 CCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 105056 | ||| | || || || ||| |||| | | | ||||||| ||||| || || | Sbjct 234753 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 234694 Query 105057 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 105116 | || || | ||||| |||| || || || |||| || ||||| | | | Sbjct 234693 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 234634 Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176 |||| ||||| || || ||| ||||| ||||| |||| || || | || | Sbjct 234633 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 234574 Query 105177 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235 ||||| || ||| || || || || | | ||||| || |||||||| ||| Sbjct 234573 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 234515 Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 105294 || | ||||| || |||| ||| || | || || | |||| || || || || Sbjct 234514 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 234456 Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354 ||||| | ||| | || ||||||||||| ||||| || ||||||||||| ||| Sbjct 234455 CAAGGAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGC---TTC 234399 Query 105355 A---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411 | ||| | || ||| ||||| || || || | || ||||||| || || Sbjct 234398 ATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCA 234339 Query 105412 AGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGA 105468 || | ||| || | || ||||||| ||| | ||| | || || ||||||| Sbjct 234338 GGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGC 234282 Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528 || ||||||| ||| || | ||| | || ||| || ||| | || || || Sbjct 234281 CGCACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGAT 234222 Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588 |||||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | Sbjct 234221 GCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAG 234162 Query 105589 GAACATCTA 105597 ||||| || Sbjct 234161 CAACATTTA 234153 >seq177 Length=462105 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 94865 || ||| | |||||||| ||||||||||||||||||||||| | ||| ||| ||||| Sbjct 265810 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 265752 Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925 | ||||| ||||| || ||||||||| | || ||| ||||| |||||||| ||||| Sbjct 265751 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 265692 Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| ||||| | ||| ||| || || Sbjct 265691 CCGTGATGAGGGCATGCACACAGACTTCGC 265662 >seq275 Length=1016850 Score = 93.3 bits (102), Expect = 5e-14 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 |||||||||||||| || || |||| ||| ||| ||||||||||| ||| | ||||| Sbjct 574972 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 575031 Query 169229 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 169286 || |||| | | |||| |||||||| ||||| |||||||| | |||||||| Sbjct 575032 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 575090 Query 169287 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTA 169345 | || |||| ||| ||| || | ||| || || |||||||| ||||| | Sbjct 575091 GTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 575148 Query 169346 CACTTCCCACGAAGAGGGAAGACACC 169371 ||| || ||||| ||||||||||| Sbjct 575149 ATCTTACCCCGAAGTGGGAAGACACC 575174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258641935040