Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07- 28] 296 sequences; 30,157,647 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq77 145 2e-29 seq253 104 7e-17 seq223 104 7e-17 >seq77 Length=597274 Score = 145 bits (160), Expect = 2e-29 Identities = 468/726 (64%), Gaps = 3/726 (0%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| || ||||| || || || || || | | | | | ||||||| Sbjct 485234 GCAATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGAGATGATCGC 485175 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | || || || || || ||||| || ||| | ||||| || |||| ||| || || || Sbjct 485174 ATCGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTCGCCTTCACA 485115 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | || |||||| |||| || || || | || || ||| ||| Sbjct 485114 GACACCGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAACCCAGCAAAC 485055 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || || || || |||||| | || || | | || ||| | ||| | Sbjct 485054 ACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAGGTGCAAGCA 484995 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 ||| | || || ||||| || | || | || | ||| || ||| | || | Sbjct 484994 GATATGAAGCACTTTCCCTTCAAGGTCATCGAGAAGGCCGGC---AAGCCAGTCATCTCG 484938 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 || || | || || || | || || || ||| || || || || | ||| || | Sbjct 484937 GTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCCATGATTCTC 484878 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 || ||| || | || || | || | |||| || || | | || || | Sbjct 484877 ACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAACGCCGTCGTC 484818 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 || || ||||| ||||| || || | ||||| ||||| || || || ||| |||| Sbjct 484817 ACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACCAAGGACGCCGGCCTCATT 484758 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | || || || | || || || || || ||||| ||||| ||||| || || Sbjct 484757 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCGACTGCAGCAGCCATTGCCTACGGT 484698 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 || || || | || ||| || ||| | || || || ||| | ||||||||||| Sbjct 484697 CTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGTGGTGGTACC 484638 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 || |||||||| || || ||| |||| ||||| ||||| || || || | ||||| ||| Sbjct 484637 TTCGATGTATCGCTGCTCACAATTGAGGAGGGTATTTTCGAGGTCAAGTCCACTGCCGGT 484578 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || || || | ||||| || || || || || || || || || || || || ||| Sbjct 484577 GACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTTGTCAACCACTTCGTAAACGAA 484518 Query 349919 TTTAAG 349924 || ||| Sbjct 484517 TTCAAG 484512 >seq253 Length=1263309 Score = 104 bits (114), Expect = 7e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| ||||| ||| || || || || || || Sbjct 702478 CATACCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTC 702419 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || || || | |||||||| ||||| Sbjct 702418 GGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGG 702359 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||||| ||||| |||||||| || || ||| || ||||| || || | || || | | Sbjct 702358 TGGAATGCCTTCCTTATCCTGGATCTT-GCTCTTCACATTGTCGATGGTGTCGGACGACT 702300 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 |||| || || |||| ||||| ||||| | ||| Sbjct 702299 CAACCTCGAGGGTAATGGTCTTGCCGGTGACTGT 702266 Score = 104 bits (114), Expect = 7e-17 Identities = 166/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || ||||| || ||||| || || || | Sbjct 702710 TTTGCATACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGT 702651 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| || || || || || ||||| || || || ||||| | Sbjct 702650 AGTCGGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGT 702591 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || || || || || ||||| || || | || ||||| || || | || | || Sbjct 702590 CAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTC-GCTG 702532 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || || | ||||| ||||| || || || || || |||||||| Sbjct 702531 GACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 702476 >seq223 Length=355437 Score = 104 bits (114), Expect = 7e-17 Identities = 244/368 (66%), Gaps = 3/368 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || ||||| | ||||| ||| | | | || ||||||||| | || || |||| | Sbjct 95550 CCAGAAGAGGTCTCATCCATGATCCTGGGCAAGATGAAGGAAGTCGCCGAGTCATACCTC 95491 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || |||| || || | || || | || || |||||||| || || || ||||||||| Sbjct 95490 GGCGAAAAGGTCACCAACGCAGTCGTCACAGTCCCAGCCTACTTCAACGACGCCCAGCGT 95431 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 | || || || || ||||||| || || || | || || || | | | || ||| Sbjct 95430 GCCGCTACCAAGGACGCTGGCACGATCGCCGGTCTCAACGTCCTCCGTGTCGTCAACGAA 95371 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || || || || || | || || || || || || || ||| | ||| | || Sbjct 95370 CCTACCGCCGCCGCTCTCGCCTACGGCCTCGACAA---GACCGACAAGGAACGCCAGATC 95314 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || | | || | |||||||||||||| ||||| || | | || | || |||| Sbjct 95313 ATTGTCTACGACCTCGGTGGTGGTACTTTCGATGTCTCCATCTTGACTGTCGACCAGGGT 95254 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 | || || ||| | ||||| || ||||| || ||||||||||| || || || || | Sbjct 95253 GTGTTCGAGGTTCAGGCAACGGCCGGTGACACCCATCTTGGTGGTGAGGACTTCGACCAG 95194 Query 349892 CGTCTCGT 349899 ||| |||| Sbjct 95193 CGTGTCGT 95186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515248653397688