Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07- 28] 296 sequences; 30,157,647 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq253 167 5e-36 seq199 129 1e-24 seq22 93.3 1e-13 >seq253 Length=1263309 Score = 167 bits (184), Expect = 5e-36 Identities = 172/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || | ||| ||||||||||| || |||||||| ||||||| ||| Sbjct 702928 TCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAG 702869 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 |||| || || || ||||||||||| |||||||| || || || ||||| || || | Sbjct 702868 TGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGAT 702809 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || |||||||| ||||||||| || ||||| ||||| ||||| || ||| || || Sbjct 702808 GCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTC 702749 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| ||||| || ||||| ||||| || || | ||||| Sbjct 702748 GAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 702704 Score = 158 bits (174), Expect = 3e-33 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| || || |||||| ||| || |||||||| || || | ||||| Sbjct 702469 ACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGT 702410 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||||||||| || | |||||| |||||||| |||| || Sbjct 702409 GCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCC 702350 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||||||| ||||| || ||||||||||| || ||||||||||| Sbjct 702349 TTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAG 702290 Query 211073 AGTGATCGTCTTTCCCGTGA 211092 || || ||||| || |||| Sbjct 702289 GGTAATGGTCTTGCCGGTGA 702270 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||| || ||||| |||||||| || || | || || | ||||| Sbjct 702687 AGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 702628 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||||||||| || || ||||| || |||||||| || | || ||||||||| Sbjct 702627 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 702568 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| | || |||||||| ||||| ||| Sbjct 702567 TGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 702508 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 702507 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 702476 >seq199 Length=410581 Score = 129 bits (142), Expect = 1e-24 Identities = 145/193 (75%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 210916 GAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGC 210975 || || || | || |||||||| || || | ||||| | ||||| |||| |||||| | Sbjct 250867 GAATGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTC 250808 Query 210976 CTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTT 211035 | |||||||| | || || ||||| || || | ||| ||||||||||||||||| | Sbjct 250807 CAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCT 250748 Query 211036 TCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGA 211092 | || || ||||||||||| ||| || |||||||| ||||| ||||| || |||| Sbjct 250747 TGACATTGTCGATGGTGTC---GCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGA 250691 Query 211093 GAGTCTTTACAAA 211105 | |||||||| || Sbjct 250690 GGGTCTTTACGAA 250678 >seq22 Length=805712 Score = 93.3 bits (102), Expect = 1e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||| ||| || || ||||| || || | ||||| | ||||| Sbjct 590044 AGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCC 590103 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| | ||| || ||||| || |||| ||| |||||||| Sbjct 590104 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 590162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159147603916040